ENSMUSG00000045302


Mus musculus

Features
Gene ID: ENSMUSG00000045302
  
Biological name :Preb
  
Synonyms : Preb / prolactin regulatory element binding / Q9WUQ2
  
Possible biological names infered from orthology : Q9HCU5
  
Species: Mus musculus
  
Chr. number: 5
Strand: -1
Band: B1
Gene start: 30950853
Gene end: 30960361
  
Corresponding Affymetrix probe sets: 10529041 (MoGene1.0st)   1416502_a_at (Mouse Genome 430 2.0 Array)   1455667_at (Mouse Genome 430 2.0 Array)   1456037_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000144263
Ensembl peptide - ENSMUSP00000144321
Ensembl peptide - ENSMUSP00000074387
Ensembl peptide - ENSMUSP00000143990
NCBI entrez gene - 50907     See in Manteia.
MGI - MGI:1355326
RefSeq - NM_016703
RefSeq - XM_006504017
RefSeq - XM_006504015
RefSeq - NM_001294302
RefSeq Peptide - NP_001281231
RefSeq Peptide - NP_057912
swissprot - F6XLZ3
swissprot - Q3UAP1
swissprot - Q9WUQ2
swissprot - A0A0J9YU39
swissprot - D3Z3S1
Ensembl - ENSMUSG00000045302
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 prebENSDARG00000101602Danio rerio
 PREBENSGALG00000029369Gallus gallus
 PREBENSG00000138073Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR011047  Quinoprotein alcohol dehydrogenase-like superfamily
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR036322  WD40-repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003400 regulation of COPII vesicle coating IBA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport ISS
 biological_processGO:0009306 protein secretion IBA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0032527 protein exit from endoplasmic reticulum ISS
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 biological_processGO:0048208 COPII vesicle coating ISS
 biological_processGO:0065009 regulation of molecular function IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030176 integral component of endoplasmic reticulum membrane ISS
 cellular_componentGO:0070971 endoplasmic reticulum exit site IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity ISS
 molecular_functionGO:0005090 Sar guanyl-nucleotide exchange factor activity IDA
 molecular_functionGO:0005096 GTPase activator activity IBA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0051020 GTPase binding IPI


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
Cargo concentration in the ER


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000020986 Q01405 / Sec23a / Protein transport protein Sec23A / Q15436* / Sec23 homolog A, coat complex II component*  / reaction / complex
 ENSMUSG00000021000 Mia2 / Q91ZV0 / Mus musculus melanoma inhibitory activity 2 (Mia2), transcript variant 1, mRNA. / CTAGE5* / CTAGE6* / CTAGE8* / CTAGE9* / A4D2H0* / A4FU28* / CTAGE1* / CTAGE4* / O15320* / P...  / reaction / complex
 ENSMUSG00000020386 Sar1b / Q9CQC9 / secretion associated Ras related GTPase 1B / Q9Y6B6*  / reaction






 

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