ENSMUSG00000045394


Mus musculus

Features
Gene ID: ENSMUSG00000045394
  
Biological name :Epcam
  
Synonyms : Epcam / Epithelial cell adhesion molecule / Q99JW5
  
Possible biological names infered from orthology : P16422
  
Species: Mus musculus
  
Chr. number: 17
Strand: 1
Band: E4
Gene start: 87635979
Gene end: 87651106
  
Corresponding Affymetrix probe sets: 10447383 (MoGene1.0st)   1416579_a_at (Mouse Genome 430 2.0 Array)   1447899_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000061935
NCBI entrez gene - 17075     See in Manteia.
MGI - MGI:106653
RefSeq - NM_008532
RefSeq Peptide - NP_032558
swissprot - Q99JW5
Ensembl - ENSMUSG00000045394
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 epcamENSDARG00000040534Danio rerio
 EPCAMENSGALG00000008969Gallus gallus
 EPCAMENSG00000119888Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8BGV3 / Tacstd2 / Tumor-associated calcium signal transducer 2 / P09758*ENSMUSG0000005139752


Protein motifs (from Interpro)
Interpro ID Name
 IPR000716  Thyroglobulin type-1
 IPR036857  Thyroglobulin type-1 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001657 ureteric bud development IEP
 biological_processGO:0008284 positive regulation of cell proliferation IEA
 biological_processGO:0023019 signal transduction involved in regulation of gene expression IEA
 biological_processGO:0043066 negative regulation of apoptotic process IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0048863 stem cell differentiation IEA
 biological_processGO:0098742 cell-cell adhesion via plasma-membrane adhesion molecules IEA
 biological_processGO:2000048 negative regulation of cell-cell adhesion mediated by cadherin IEA
 biological_processGO:2000147 positive regulation of cell motility IEA
 biological_processGO:2000648 positive regulation of stem cell proliferation IEA
 cellular_componentGO:0005886 plasma membrane ISO
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0005923 bicellular tight junction IBA
 cellular_componentGO:0009986 cell surface IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016323 basolateral plasma membrane IEA
 cellular_componentGO:0016324 apical plasma membrane IEA
 cellular_componentGO:0016328 lateral plasma membrane ISS
 cellular_componentGO:0030054 cell junction IEA
 molecular_functionGO:0044877 protein-containing complex binding IEA
 molecular_functionGO:0098641 cadherin binding involved in cell-cell adhesion IEA


Pathways (from Reactome)
Pathway description
Cell surface interactions at the vascular wall


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000465 gastrointestinal hemorrhage "bleeding in the stomach and/or the intestines" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, tc:Teresa Chu , Mouse Genome Informatics Curator, J:60896]
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Allelic Composition: Fras1tm1.2Pjsc/Fras1tm1.2Pjsc
Genetic Background: involves: C57BL/6 * FVB/N * SJL

 MP:0000477 abnormal intestine morphology "malformation of the digestive tube passing from the stomach to the anus" [J:48968]
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Allelic Composition: Ntrk2tm2.1Tes/Ntrk2tm2.1Tes
Genetic Background: involves: 129S4/SvJae * C57BL/6J

Allelic Composition: Epcamtm1.2Msiv/Epcamtm1.2Msiv
Genetic Background: involves: C57BL/6 * FVB/N * SJL

 MP:0000479 abnormal intestinal cell "anomalous structure or development of the cells comprising the intestine" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: EpcamGt(RST412)Byg/EpcamGt(RST412)Byg
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0000488 abnormal intestinal epithelium morphology "anomalous structure or development of the cellular avascular layer of the digestive tube passing from the stomach to the anus" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: EpcamGt(RST412)Byg/EpcamGt(RST412)Byg
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0000490 abnormal crypts of Lieberkuhn morphology "malformation or defects in the tubular intestinal glands found in the mucosal membranes" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
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Allelic Composition: Ntrk2tm2.1Tes/Ntrk2tm2.1Tes
Genetic Background: involves: 129S4/SvJae * C57BL/6J

 MP:0000495 abnormal colon morphology "malformation of the portion of the large intestine between the cecum and the rectum" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: EpcamGt(RST412)Byg/EpcamGt(RST412)Byg
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0000511 abnormal intestinal mucosa morphology "structural or developmental anomalies of the mucous lining of the intestine; this consists of epithelium, lamina, propria, and a layer of smooth muscle cells" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Fras1tm1.2Pjsc/Fras1tm1.2Pjsc
Genetic Background: involves: C57BL/6 * FVB/N * SJL

Allelic Composition: EpcamGt(RST412)Byg/EpcamGt(RST412)Byg
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0001265 reduced body size "smaller than average body weight, height and/or length of an organism compared to controls" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, J:23170]
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Allelic Composition: Myo7am1Btlr/Myo7am1Btlr
Genetic Background: C57BL/6J-Myo7am1Btlr

 MP:0001634 internal hemorrhage "blood loss in the interior of the body due to vessel rupture or dysmorphology " [J:23170]
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Allelic Composition: EpcamGt(RST412)Byg/EpcamGt(RST412)Byg
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0001698 reduced embryo size "smaller proportions of embryo compared to littermates" [J:61790]
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Allelic Composition: Aw/Aw,As/As
Genetic Background: involves: 101/H * C3H/HeH

 MP:0001713 reduced trophoblast cell number "fewer than normal number of cells of the extraembryonic cell layer that contributes to the placenta" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, MGI:cls, J:23171]
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Allelic Composition: Aw/Aw,As/As
Genetic Background: involves: 101/H * C3H/HeH

 MP:0001716 abnormal placental labyrinth "malformed structure where embryonic blood vessels are surrounded by trophoblast cells and maternal blood" [J:23171]
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Allelic Composition: Aw/Aw,As/As
Genetic Background: involves: 101/H * C3H/HeH

 MP:0001730 embryonic growth arrest "the cessation of development beyond a particular stage" [J:17509]
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Allelic Composition: Aw/Aw,As/As
Genetic Background: involves: 101/H * C3H/HeH

 MP:0001732 postnatal growth retardation "slow or limited development after birth " [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Fras1tm1.2Pjsc/Fras1tm1.2Pjsc
Genetic Background: involves: C57BL/6 * FVB/N * SJL

Allelic Composition: EpcamGt(RST412)Byg/EpcamGt(RST412)Byg
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

Allelic Composition: Epcamtm1.2Msiv/Epcamtm1.2Msiv
Genetic Background: involves: C57BL/6 * FVB/N * SJL

 MP:0002581 abnormal ileum morphology "malformation of the portion of the small intestine that extends from the jejunum to the colon" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, csmith:Cynthia L. Smith , Mouse Genome Informatics Curator, J:70183]
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Allelic Composition: Epcamtm1.2Msiv/Epcamtm1.2Msiv
Genetic Background: involves: C57BL/6 * FVB/N * SJL

 MP:0002621 delayed neural tube closure "delayed fusion of the neuroepithelial layer in early development" [J:79790, cml:Cathleen M. Lutz , Mouse Genome Informatics Curator]
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Allelic Composition: Aw/Aw,As/As
Genetic Background: involves: 101/H * C3H/HeH

 MP:0003091 abnormal cell migration "defect in the movement of cells during developmental processes" [smb:Susan M. Bello, Mouse Genome Informatics Curator]
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Allelic Composition: Dnah11b2b1203Clo/Dnah11b2b1203Clo
Genetic Background: C57BL/6J-Dnah11b2b1203Clo

 MP:0003271 abnormal duodenum morphology "malformation in the first division of the small intestine that extends from the pyloris to the junction with the jejunum " [MeSH:National Library of Medicine - Medical Subject Headings , 2003]
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Allelic Composition: Epcamtm1.2Msiv/Epcamtm1.2Msiv
Genetic Background: involves: C57BL/6 * FVB/N * SJL

 MP:0003288 intestinal edema "an accumulation of an excessive amount of serous fluid in the intestine or intestinal cells " [ncbi:Matthew Mailman, NCBI request]
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Allelic Composition: Epcamtm1.2Msiv/Epcamtm1.2Msiv
Genetic Background: involves: C57BL/6 * FVB/N * SJL

 MP:0003306 small intestinal inflammation "local accumulation of fluid, plasma proteins, and leukocytes in the small intestine" [MeSH:National Library of Medicine - Medical Subject Headings , 2003, ncbi:Matthew Mailman, NCBI request]
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Allelic Composition: Epcamtm1.2Msiv/Epcamtm1.2Msiv
Genetic Background: involves: C57BL/6 * FVB/N * SJL

 MP:0003720 abnormal neural tube closure "abnormal invagination and fusion of the neuroepithelial layer in early development" [monikat:Monika Tomczuk, Mouse Genome Informatics Curator, J:99099]
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Allelic Composition: Aw/Aw,As/As
Genetic Background: involves: 101/H * C3H/HeH

 MP:0004002 abnormal jejunum morphology "malformation of the portion of the small intestine that extends from the duodenum to the ileum" [monikat:Monika Tomczuk, Mouse Genome Informatics Curator]
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Allelic Composition: Epcamtm1.2Msiv/Epcamtm1.2Msiv
Genetic Background: involves: C57BL/6 * FVB/N * SJL

 MP:0004259 small placenta "reduced size of the size or shape of the organ of metabolic interchange between fetus and mother" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Aw/Aw,As/As
Genetic Background: involves: 101/H * C3H/HeH

 MP:0005036 diarrhea "abnormally frequent discharge of semi-solid or fluid fecal matter from the bowel" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Fras1tm1.2Pjsc/Fras1tm1.2Pjsc
Genetic Background: involves: C57BL/6 * FVB/N * SJL

 MP:0005048 thrombosis "formation within a tissue or the vascular lumen of a thrombus, an aggregation of coagulated blood containing platelets, fibrin, and entrapped cellular elements " [Pathology:ISBN 0-397-51047-0, cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Aw/Aw,As/As
Genetic Background: involves: 101/H * C3H/HeH

 MP:0005202 lethargy "mild impairment of consciousness resulting in reduced alertness and awareness; ultimately due to generalized brain dysfunction" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Epcamtm1.2Msiv/Epcamtm1.2Msiv
Genetic Background: involves: C57BL/6 * FVB/N * SJL

 MP:0005362 abnormal Langerhans cell physiology "atypical or failure of normal function of the phagocytic dendritic cells principally found in the epidemis" [Immunobiology , The Immune System in Health and Disease:ISBN 0-8153-1691-7, cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Dnah11b2b1203Clo/Dnah11b2b1203Clo
Genetic Background: C57BL/6J-Dnah11b2b1203Clo

 MP:0005617 increased susceptibility to type IV hypersensitivity reaction "greater likelihood of developing an antigen-elicited cellular immune reaction that results in tissue damage, but does not require Ab participation; the response is seen at the area of contact " [Pathology:ISBN 0-397-51047-0, cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Dnah11b2b1203Clo/Dnah11b2b1203Clo
Genetic Background: C57BL/6J-Dnah11b2b1203Clo

 MP:0008117 abnormal Langerhans cell morphology "any structural anomaly of a stellate dendritic cell of myeloid origin, that appears clear on light microscopy and has a dark-staining, indented nucleus and characteristic inclusions (Birbeck granules) in the cytoplasm; Langerhans cells are found principally in the stratum spinosum of the epidermis, but they also occur in other stratified epithelia and have been identified in the lung, lymph nodes, spleen, and thymus" [CL:0000453, ISBN:0781735149, MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Dnah11b2b1203Clo/Dnah11b2b1203Clo
Genetic Background: C57BL/6J-Dnah11b2b1203Clo

 MP:0008489 postnatal slow weight gain "the weight gain over a span of postnatal developmental time is slower than controls, with or without ever attaining a similar weight to controls as adults" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: EpcamGt(RST412)Byg/EpcamGt(RST412)Byg
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0008882 abnormal enterocyte physiology "any functional anomaly of the epithelial cells that have an apical plasma membrane folded into microvilli to provide ample surface for the absorption of nutrients from the intestinal lumen" [CL:0000584, MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Epcamtm1.2Msiv/Epcamtm1.2Msiv
Genetic Background: involves: C57BL/6 * FVB/N * SJL

 MP:0008883 abnormal enterocyte proliferation "anomaly in the ability of the enterocyte cell population to undergo expansion by cell division" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Epcamtm1.2Msiv/Epcamtm1.2Msiv
Genetic Background: involves: C57BL/6 * FVB/N * SJL

 MP:0010155 abnormal intestine physiology "any functional anomaly of the digestive tube passing from the stomach to the anus" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Fras1tm1.2Pjsc/Fras1tm1.2Pjsc
Genetic Background: involves: C57BL/6 * FVB/N * SJL

Allelic Composition: EpcamGt(RST412)Byg/EpcamGt(RST412)Byg
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

Allelic Composition: Epcamtm1.2Msiv/Epcamtm1.2Msiv
Genetic Background: involves: C57BL/6 * FVB/N * SJL

 MP:0011085 complete postnatal lethality "premature death anytime between the neonatal period and weaning age of all organisms of a given genotype in a population (Mus: P1 to approximately 3 weeks of age)" [MGI:csmith]
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Allelic Composition: EpcamGt(RST412)Byg/EpcamGt(RST412)Byg
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

Allelic Composition: Epcamtm1.2Msiv/Epcamtm1.2Msiv
Genetic Background: involves: C57BL/6 * FVB/N * SJL

 MP:0011098 complete embryonic lethality during organogenesis "death of all organisms of a given genotype in a population between embryo turning and the completion of organogenesis (Mus: E9 to less than E14)" [MGI:csmith]
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Allelic Composition: Aw/Aw,As/As
Genetic Background: involves: 101/H * C3H/HeH

 MP:0011112 partial lethality during fetal growth through weaning "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms between the completion of organogenesis and weaning age (Mus: E14 to approximately 3 weeks of age)" [MGI:csmith]
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Allelic Composition: Fras1tm1.2Pjsc/Fras1tm1.2Pjsc
Genetic Background: involves: C57BL/6 * FVB/N * SJL

Allelic Composition: Epcamtm1.2Hmd/Epcamtm1.2Hmd
Genetic Background: involves: 129 * C57BL/6

 MP:0014083 blunted small intestinal villi "abnormal flattening of the surface of the tiny hair-like projections which protrude from the inside of the small intestine and contain blood vessels that capture digested nutrients that are absorbed through the intestinal wall; usually due to intestinal damage or injury" [MGI:Anna, PMID:16679353]
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Allelic Composition: Epcamtm1.2Msiv/Epcamtm1.2Msiv
Genetic Background: involves: C57BL/6 * FVB/N * SJL

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000045394 Epcam / Q99JW5 / Epithelial cell adhesion molecule / P16422*  / complex / reaction






 

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