ENSMUSG00000046974


Mus musculus

Features
Gene ID: ENSMUSG00000046974
  
Biological name :BC053393
  
Synonyms : BC053393 / cDNA sequence BC053393
  
Possible biological names infered from orthology : HAVCR1 / hepatitis A virus cellular receptor 1 / Q96D42
  
Species: Mus musculus
  
Chr. number: 11
Strand: 1
Band: B1.1
Gene start: 46571536
Gene end: 46589232
  
Corresponding Affymetrix probe sets: 10375454 (MoGene1.0st)   1447604_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000050057
NCBI entrez gene - 407814     See in Manteia.
MGI - MGI:3039605
RefSeq - NM_001025435
RefSeq Peptide - NP_001020606
swissprot - A0A0B4J1F6
Ensembl - ENSMUSG00000046974
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 timd4ENSDARG00000077257Danio rerio
 HAVCR1ENSGALG00000017362Gallus gallus
 HAVCR1ENSG00000113249Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Gm12169 / HAVCR1* / Q96D42* / hepatitis A virus cellular receptor 1*ENSMUSG0000007892455
Havcr1 / Q96D42* / hepatitis A virus cellular receptor 1*ENSMUSG0000004040538
Timd2 / T cell immunoglobulin and mucin domain containing 2 / HAVCR1* / Q96D42* / hepatitis A virus cellular receptor 1*ENSMUSG0000004041329
Havcr2 / Q8VIM0 / Hepatitis A virus cellular receptor 2 homolog / Q8TDQ0* / hepatitis A virus cellular receptor 2*ENSMUSG0000002039929
Timd4 / Q6U7R4 / T-cell immunoglobulin and mucin domain-containing protein 4 / Q96H15* / T cell immunoglobulin and mucin domain containing 4*ENSMUSG0000005554626


Protein motifs (from Interpro)
Interpro ID Name
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013106  Immunoglobulin V-set domain
 IPR013783  Immunoglobulin-like fold
 IPR036179  Immunoglobulin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001512 trunk curl "posture of the trunk in a curled position" [cml:Cathleen M. Lutz , Mouse Genome Informatics Curator]
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Allelic Composition: Arih2tm1.1(KOMP)Vlcg/Arih2+
Genetic Background: C57BL/6N-Arih2tm1.1(KOMP)Vlcg/Ucd

 MP:0005292 improved glucose tolerance "better than the normal response to oral consumption or intravenous injection of specified amounts of glucose and indicative of insulin sensitivity; measured by determining whole blood or plasma sugar level in a fasting state before and after taking glucose at specified intervals" [MeSH:National Library of Medicine - Medical Subject Headings , 2003]
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Allelic Composition: Arih2tm1.1(KOMP)Vlcg/Arih2+
Genetic Background: C57BL/6N-Arih2tm1.1(KOMP)Vlcg/Ucd

 MP:0005293 impaired glucose tolerance "less than the normal response to oral consumption or intravenous injection of specified amounts of glucose and indicative of insulin resistance; measured by determining whole blood or plasma sugar level in a fasting state before and after taking glucose at specified intervals" [MeSH:National Library of Medicine - Medical Subject Headings , 2003]
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Allelic Composition: Arih2tm1.1(KOMP)Vlcg/Arih2+
Genetic Background: C57BL/6N-Arih2tm1.1(KOMP)Vlcg/Ucd

 MP:0011100 complete preweaning lethality "death of all organisms of a given genotype in a population between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
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Allelic Composition: Arf4tm1b(KOMP)Wtsi/Arf4tm1b(KOMP)Wtsi
Genetic Background: C57BL/6N-Arf4tm1b(KOMP)Wtsi/Ucd

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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