ENSGALG00000017362


Gallus gallus

Features
Gene ID: ENSGALG00000017362
  
Biological name :HAVCR1
  
Synonyms : HAVCR1
  
Possible biological names infered from orthology : BC053393 / cDNA sequence BC053393 / Gm12169 / HAVCR2 / hepatitis A virus cellular receptor 1 / hepatitis A virus cellular receptor 2 / Hepatitis A virus cellular receptor 2 homolog / Q8TDQ0 / Q8VIM0 / Q96D42 / T cell immunoglobulin and mucin domain containing 2 / Timd2
  
Species: Gallus gallus
  
Chr. number: 13
Strand: 1
Band:
Gene start: 11459253
Gene end: 11468309
  
Corresponding Affymetrix probe sets: Gga.6031.1.S1_at (Chicken Array)   Gga.6031.1.S1_s_at (Chicken Array)   Gga.6031.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000027993
Ensembl peptide - ENSGALP00000059731
Ensembl peptide - ENSGALP00000055871
Ensembl peptide - ENSGALP00000054868
Ensembl peptide - ENSGALP00000044732
NCBI entrez gene - 416249     See in Manteia.
RefSeq - XM_015293769
RefSeq - NM_001030617
RefSeq - NM_001305578
RefSeq - NM_001305579
RefSeq Peptide - NP_001292508
RefSeq Peptide - NP_001292507
RefSeq Peptide - NP_001025788
swissprot - A0A1D5PPR4
swissprot - F1NMX0
swissprot - A0A1D5NWJ2
swissprot - A0A1L1RLV3
swissprot - A0A1D5PSI5
Ensembl - ENSGALG00000017362
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 timd4ENSDARG00000077257Danio rerio
 HAVCR1ENSG00000113249Homo sapiens
 HAVCR2ENSG00000135077Homo sapiens
 BC053393ENSMUSG00000046974Mus musculus
 Gm12169ENSMUSG00000078924Mus musculus
 Havcr1ENSMUSG00000040405Mus musculus
 Havcr2ENSMUSG00000020399Mus musculus
 Timd2ENSMUSG00000040413Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TIMD4 / T-cell immunoglobulin and mucin domain-containing protein 4 precursor / Q6U7R4* / Q96H15* / T cell immunoglobulin and mucin domain containing 4* / T-cell immunoglobulin and mucin d...ENSGALG0000000387622


Protein motifs (from Interpro)
Interpro ID Name
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013106  Immunoglobulin V-set domain
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr