ENSMUSG00000048495


Mus musculus

Features
Gene ID: ENSMUSG00000048495
  
Biological name :Tyw5
  
Synonyms : A2RSX7 / tRNA-yW synthesizing protein 5 / Tyw5
  
Possible biological names infered from orthology : A2RUC4
  
Species: Mus musculus
  
Chr. number: 1
Strand: -1
Band: C1.3
Gene start: 57388237
Gene end: 57407101
  
Corresponding Affymetrix probe sets: 10354792 (MoGene1.0st)   1434692_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000128576
Ensembl peptide - ENSMUSP00000078912
Ensembl peptide - ENSMUSP00000125386
Ensembl peptide - ENSMUSP00000125427
NCBI entrez gene - 68736     See in Manteia.
MGI - MGI:1915986
RefSeq - XM_017322330
RefSeq - NM_001037742
RefSeq - NM_001302962
RefSeq - NM_001302963
RefSeq - NM_001302964
RefSeq - XM_011238586
RefSeq - XM_011238587
RefSeq Peptide - NP_001289891
RefSeq Peptide - NP_001032831
RefSeq Peptide - NP_001289892
RefSeq Peptide - NP_001289893
swissprot - G3UW53
swissprot - E0CZH0
swissprot - A2RSX7
Ensembl - ENSMUSG00000048495
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tyw5ENSDARG00000069672Danio rerio
 TYW5ENSGALG00000008145Gallus gallus
 TYW5ENSG00000162971Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8BK58 / Hspbap1 / HSPB1-associated protein 1 / Q96EW2*ENSMUSG0000002284921
Kdm8 / Q9CXT6 / JmjC domain-containing protein 5 / Q8N371* / lysine demethylase 8*ENSMUSG0000003075221
Hif1an / Q8BLR9 / Hypoxia-inducible factor 1-alpha inhibitor / Q9NWT6* / hypoxia inducible factor 1 alpha subunit inhibitor*ENSMUSG0000003645020


Protein motifs (from Interpro)
Interpro ID Name
 IPR003347  JmjC domain
 IPR029612  tRNA wybutosine-synthesizing protein 5


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0031591 wybutosine biosynthetic process IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0000049 tRNA binding IEA
 molecular_functionGO:0005506 iron ion binding ISO
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEA
 molecular_functionGO:0042803 protein homodimerization activity ISS
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0051213 dioxygenase activity IEA
 molecular_functionGO:0102524 tRNAPhe (7-(3-amino-3-carboxypropyl)wyosine37-C2)-hydroxylase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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