ENSMUSG00000048699


Mus musculus

Features
Gene ID: ENSMUSG00000048699
  
Biological name :Krt90
  
Synonyms : Krt90
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 15
Strand: -1
Band: F2
Gene start: 101552356
Gene end: 101562950
  
Corresponding Affymetrix probe sets: 10432734 (MoGene1.0st)   
  
Cross references: Ensembl peptide - ENSMUSP00000023714
NCBI entrez gene - 239673     See in Manteia.
MGI - MGI:3045312
RefSeq - NM_177717
RefSeq Peptide - NP_808385
swissprot - E9Q1Z0
Ensembl - ENSMUSG00000048699
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 krt4ENSDARG00000017624Danio rerio
 krt5ENSDARG00000058371Danio rerio
 krt8ENSDARG00000058358Danio rerio
 zgc:158846ENSDARG00000058462Danio rerio
 ENSGALG00000043689Gallus gallus
 KRT6AENSGALG00000030629Gallus gallus
 KRT75ENSGALG00000035972Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Krt5 / Q922U2 / keratin 5 / P13647*ENSMUSG0000006152768
Krt6a / P50446 / Keratin, type II cytoskeletal 6A / KRT6B* / KRT6C* / P04259* / P48668* / P02538* / keratin 6A* / keratin 6B* / keratin 6C*ENSMUSG0000005835466
Krt75 / Q8BGZ7 / Keratin, type II cytoskeletal 75 / O95678* / keratin 75*ENSMUSG0000002298666
Krt6b / keratin 6B / KRT6A* / KRT6C* / P02538* / P04259* / P48668* / keratin 6A* / keratin 6C*ENSMUSG0000002304165
Gm5414 / KRT6A* / KRT6B* / KRT6C* / P04259* / P48668* / P02538* / keratin 6A* / keratin 6B* / keratin 6C*ENSMUSG0000006423256
Krt76 / Q3UV17 / Keratin, type II cytoskeletal 2 oral / Q01546* / keratin 76*ENSMUSG0000007540256
Krt4 / P07744 / Keratin, type II cytoskeletal 4 / P19013* / keratin 4*ENSMUSG0000005966856
Krt7 / Q9DCV7 / Keratin, type II cytoskeletal 7 / P08729* / keratin 7*ENSMUSG0000002303953
Gm5478 / KRT6A* / KRT6B* / KRT6C* / P04259* / P48668* / P02538* / keratin 6A* / keratin 6B* / keratin 6C*ENSMUSG0000009524153
Krt79 / Q8VED5 / Keratin, type II cytoskeletal 79 / Q5XKE5* / keratin 79*ENSMUSG0000006139753
Krt8 / P11679 / Keratin, type II cytoskeletal 8 / P05787* / keratin 8*ENSMUSG0000004938252


Protein motifs (from Interpro)
Interpro ID Name
 IPR001664  Intermediate filament protein
 IPR003054  Keratin, type II
 IPR018039  Intermediate filament protein, conserved site
 IPR032444  Keratin type II head


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005882 intermediate filament IEA
 cellular_componentGO:0045095 keratin filament IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005198 structural molecule activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000579 abnormal nail morphology "structural or developmental anomaly of any of the thin, horny, translucent plates covering the dorsal surface of the distal end of each terminal phalanx of the digits" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: MtdhGt(XB780)Byg/Mtdh+,Tg(MMTV-PyVT)634Mul/0
Genetic Background: FVB.Cg-MtdhGt(XB780)Byg Tg(MMTV-PyVT)634Mul

Allelic Composition: Krt90whnl/Krt90whnl
Genetic Background: B6.MRL-Krt90whnl/GrsrJ

 MP:0000583 long toenails "increased length of the toenails" [J:65045]
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Allelic Composition: MtdhGt(XB780)Byg/Mtdh+,Tg(MMTV-PyVT)634Mul/0
Genetic Background: FVB.Cg-MtdhGt(XB780)Byg Tg(MMTV-PyVT)634Mul

Allelic Composition: Krt90whnl/Krt90whnl
Genetic Background: B6.MRL-Krt90whnl/GrsrJ

 MP:0010102 increased caudal vertebrae number "increased number of the bony segments of the coccyx or tail" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: MtdhGt(XB780)Byg/Mtdh+,Tg(MMTV-PyVT)634Mul/0
Genetic Background: FVB.Cg-MtdhGt(XB780)Byg Tg(MMTV-PyVT)634Mul

 MP:0011101 partial prenatal lethality "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms between fertilization and birth (Mus: approximately E18.5)" [MGI:csmith]
Show

Allelic Composition: MtdhGt(XB780)Byg/Mtdh+,Tg(MMTV-PyVT)634Mul/0
Genetic Background: FVB.Cg-MtdhGt(XB780)Byg Tg(MMTV-PyVT)634Mul

Allelic Composition: Krt90whnl/Krt90whnl
Genetic Background: B6.MRL-Krt90whnl/GrsrJ

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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