ENSDARG00000058371


Danio rerio

Features
Gene ID: ENSDARG00000058371
  
Biological name :krt5
  
Synonyms : keratin 5 / krt5
  
Possible biological names infered from orthology : Gm5414 / Gm5478 / keratin 1 / keratin 3 / keratin 4 / keratin 6A / keratin 6B / keratin 6C / keratin 7 / keratin 71 / keratin 75 / keratin 76 / keratin 79 / keratin 8 / Keratin, type II cytoskeletal 2 oral / Keratin, type II cytoskeletal 4 / Keratin, type II cytoskeletal 6A / Keratin, type II cytoskeletal 7 / Keratin, type II cytoskeletal 75 / Keratin, type II cytoskeletal 79 / Keratin, type II cytoskeletal 8 / KRT1 / KRT3 / KRT4 / KRT6A / KRT6B / KRT6C / KRT7 / KRT71 / KRT75 / KRT76 / KRT79 / KRT8 / Krt90 / O95678 / P02538 / P04259 / P04264 / P05787 / P07744 / P08729 / P11679 / P12035 / P13647 / P19013 / P48668 / P50446 / Q01546 / Q3SY84 / Q3UV17 / Q5XKE5 / Q8BGZ7 / Q8VED5 / Q922U2 / Q9DCV7
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 10173196
Gene end: 10177458
  
Corresponding Affymetrix probe sets: Dr.1434.1.S1_at (Zebrafish Array)   NM_131156_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000108711
Ensembl peptide - ENSDARP00000116500
Ensembl peptide - ENSDARP00000115646
NCBI entrez gene - 797351     See in Manteia.
RefSeq - NM_131156
RefSeq - XM_017353615
RefSeq Peptide - NP_571231
swissprot - F1QV31
swissprot - E9QFT4
swissprot - E9QBD7
ZFIN ID - ZDB-GENE-991110-23
Ensembl - ENSDARG00000058371
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000043689Gallus gallus
 KRT5ENSGALG00000032672Gallus gallus
 KRT6AENSGALG00000030629Gallus gallus
 KRT7ENSGALG00000034868Gallus gallus
 KRT75ENSGALG00000035972Gallus gallus
 KRT1ENSG00000167768Homo sapiens
 KRT3ENSG00000186442Homo sapiens
 KRT4ENSG00000170477Homo sapiens
 KRT5ENSG00000186081Homo sapiens
 KRT6AENSG00000205420Homo sapiens
 KRT6BENSG00000185479Homo sapiens
 KRT6CENSG00000170465Homo sapiens
 KRT7ENSG00000135480Homo sapiens
 KRT71ENSG00000139648Homo sapiens
 KRT75ENSG00000170454Homo sapiens
 KRT76ENSG00000185069Homo sapiens
 KRT79ENSG00000185640Homo sapiens
 KRT8ENSG00000170421Homo sapiens
 Gm5414ENSMUSG00000064232Mus musculus
 Gm5478ENSMUSG00000095241Mus musculus
 Krt4ENSMUSG00000059668Mus musculus
 Krt5ENSMUSG00000061527Mus musculus
 Krt6aENSMUSG00000058354Mus musculus
 Krt6bENSMUSG00000023041Mus musculus
 Krt7ENSMUSG00000023039Mus musculus
 Krt75ENSMUSG00000022986Mus musculus
 Krt76ENSMUSG00000075402Mus musculus
 Krt79ENSMUSG00000061397Mus musculus
 Krt8ENSMUSG00000049382Mus musculus
 Krt90ENSMUSG00000048699Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
krt4 / keratin 4 / KRT8* / KRT5* / KRT3* / KRT1* / KRT7* / KRT76* / KRT75* / KRT71* / Krt90* / KRT6C* / KRT6B* / KRT6A* / KRT79* / Q9DCV7* / Gm5414* / Gm5478* / P02538* / P04259* / P04264* ...ENSDARG0000001762471
krt8 / Q6NWF6 / keratin 8 / KRT4* / KRT3* / KRT1* / KRT7* / KRT5* / KRT75* / KRT71* / Krt90* / KRT6C* / KRT6B* / KRT6A* / KRT79* / KRT76* / Q9DCV7* / Gm5414* / Gm5478* / P02538* / P04259* /...ENSDARG0000005835862
zgc:158846 / KRT1* / KRT4* / KRT3* / KRT8* / KRT7* / KRT5* / KRT76* / KRT75* / KRT71* / KRT6A* / KRT6C* / Krt90* / KRT6B* / KRT79* / Q3SY84* / Gm5414* / Gm5478* / O95678* / P02538* / P04259...ENSDARG0000005846248
si:dkey-222f2.1ENSDARG0000004324248


Protein motifs (from Interpro)
Interpro ID Name
 IPR001664  Intermediate filament protein
 IPR003054  Keratin, type II
 IPR032444  Keratin type II head


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0031101 fin regeneration IEP
 cellular_componentGO:0005882 intermediate filament IEA
 cellular_componentGO:0045095 keratin filament IEA
 molecular_functionGO:0005198 structural molecule activity IEA


Pathways (from Reactome)
Pathway description
Type I hemidesmosome assembly
Neutrophil degranulation
Keratinization
Formation of the cornified envelope


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism dead , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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