ENSG00000186081


Homo sapiens

Features
Gene ID: ENSG00000186081
  
Biological name :KRT5
  
Synonyms : keratin 5 / KRT5 / P13647
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: -1
Band: q13.13
Gene start: 52514575
Gene end: 52520687
  
Corresponding Affymetrix probe sets: 201820_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000447209
Ensembl peptide - ENSP00000448041
Ensembl peptide - ENSP00000448767
Ensembl peptide - ENSP00000449651
Ensembl peptide - ENSP00000449783
Ensembl peptide - ENSP00000252242
NCBI entrez gene - 3852     See in Manteia.
OMIM - 148040
RefSeq - NM_000424
RefSeq Peptide - NP_000415
swissprot - P13647
swissprot - F8VU69
swissprot - F8VV57
swissprot - F8W0C6
swissprot - H0YI76
swissprot - H0YIN9
Ensembl - ENSG00000186081
  
Related genetic diseases (OMIM): 179850 - Dowling-Degos disease 1, 179850
  131760 - Epidermolysis bullosa simplex, Dowling-Meara type, 131760
  131900 - Epidermolysis bullosa simplex, Koebner type, 131900
  131800 - Epidermolysis bullosa simplex, Weber-Cockayne type, 131800
  601001 - Epidermolysis bullosa simplex, recessive 1, 601001
  609352 - Epidermolysis bullosa simplex-MCR, 609352
  131960 - Epidermolysis bullosa simplex-MP, 131960
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 krt4ENSDARG00000017624Danio rerio
 krt5ENSDARG00000058371Danio rerio
 krt8ENSDARG00000058358Danio rerio
 zgc:158846ENSDARG00000058462Danio rerio
 ENSGALG00000043689Gallus gallus
 KRT5ENSGALG00000032672Gallus gallus
 KRT6AENSGALG00000030629Gallus gallus
 KRT75ENSGALG00000035972Gallus gallus
 Krt5ENSMUSG00000061527Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
KRT6C / P48668 / keratin 6CENSG0000017046576
KRT6A / P02538 / keratin 6AENSG0000020542076
KRT6B / P04259 / keratin 6BENSG0000018547976
KRT75 / O95678 / keratin 75ENSG0000017045474
KRT3 / P12035 / keratin 3ENSG0000018644265
KRT1 / P04264 / keratin 1ENSG0000016776864
KRT76 / Q01546 / keratin 76ENSG0000018506963
KRT4 / P19013 / keratin 4ENSG0000017047758
KRT79 / Q5XKE5 / keratin 79ENSG0000018564057
KRT7 / P08729 / keratin 7ENSG0000013548052
KRT71 / Q3SY84 / keratin 71ENSG0000013964852
KRT8 / P05787 / keratin 8ENSG0000017042152


Protein motifs (from Interpro)
Interpro ID Name
 IPR001664  Intermediate filament protein
 IPR003054  Keratin, type II
 IPR018039  Intermediate filament protein, conserved site
 IPR032444  Keratin type II head


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007010 cytoskeleton organization IEA
 biological_processGO:0008544 epidermis development TAS
 biological_processGO:0031424 keratinization TAS
 biological_processGO:0031581 hemidesmosome assembly TAS
 biological_processGO:0070268 cornification TAS
 cellular_componentGO:0005634 nucleus HDA
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005882 intermediate filament IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0045095 keratin filament IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005198 structural molecule activity IEA
 molecular_functionGO:0005200 structural constituent of cytoskeleton TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0097110 scaffold protein binding IPI


Pathways (from Reactome)
Pathway description
Type I hemidesmosome assembly
Keratinization
Formation of the cornified envelope


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000508 Ptosis "Drooping of the eyelid." [HPO:curators]
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 HP:0000597 Ophthalmoparesis "Ophthalmoplegia is a paralysis or weakness of one or more of the muscles that control eye movement." [HPO:curators]
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 HP:0000682 Abnormality of dental enamel "An abnormality of the dental enamel, which is the external layer of the teeth, being a highly mineralized substance consisting primarily of hydroxylapatite." [HPO:curators]
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 HP:0000953 Hyperpigmentation 
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 HP:0000962 Hyperkeratosis "Hyperkeratosis is thickening of the outer layer of the skin, the stratum corneum, which is composed of large, polyhedral, plate-like envelopes filled with keratin which are the dead cells that have migrated up from the stratum granulosum." [HPO:curators]
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 HP:0000972 Palmoplantar hyperkeratosis "`Hyperkeratosis` (HP:0000962) affecting the palm of the hand and the sole of the foot." [HPO:probinson]
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 HP:0000975 Hyperhidrosis "An abnormally increased perspiration." [HPO:probinson]
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 HP:0000978 Ecchymoses 
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 HP:0000982 Palmoplantar keratoderma 
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 HP:0000988 Skin rash 
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 HP:0001000 Abnormality of skin pigmentation 
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 HP:0001010 Hypopigmentation of the skin 
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 HP:0001053 Hypopigmented skin patches 
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 HP:0001056 Milia 
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 HP:0001075 Atrophic scars 
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 HP:0001508 Failure to thrive 
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 HP:0001510 Growth retardation 
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 HP:0001581 Recurrent skin infections "Infections of the skin that happen multiple times." [HPO:curators]
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 HP:0001597 Abnormality of the nails "Abnormality of the fingernails or toenails." [HPO:curators]
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 HP:0001805 Thickened nails 
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 HP:0001807 Nail ridging 
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 HP:0001933 Subcutaneous hemorrhage 
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 HP:0002019 Constipation 
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 HP:0002093 Respiratory insufficiency 
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 HP:0002164 Nail dysplasia 
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 HP:0002745 Oral leukoplakia 
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 HP:0002793 Abnormal respiratory patterns 
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 HP:0003473 Mild-moderate fatigable weakness of limb muscles 
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 HP:0003577 Onset at birth 
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 HP:0003623 Onset in neonatal period 
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 HP:0003828 Variable expressivity 
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 HP:0004334 Dermal atrophy "Partial or complete wasting (atrophy) of the skin." [HPO:curators]
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 HP:0005595 Hyperkeratosis, generalized 
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 HP:0006739 Squamous cell carcinoma of the skin "Squamous cell carcinoma of the skin is a malignant tumor of squamous epithelium." [HPO:curators]
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 HP:0007427 Reticulated skin pigmentation 
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 HP:0007438 mottled pigmentation of the trunk and proximal extremities 
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 HP:0007446 Epidermolysis bullosa involving hands and feet only 
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 HP:0007456 Progressive reticulate hyperpigmentation 
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 HP:0007494 Discrete 2 to 5-mm hyper- and hypopigmented macules 
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 HP:0007495 Prematurely aged appearance 
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 HP:0007530 Punctate palmoplantar hyperkeratosis 
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 HP:0008066 Abnormal blistering of the skin 
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 HP:0008404 Nail dystrophy, variable 
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 HP:0010783 Erythema "Redness of the skin, caused by hyperemia of the capillaries in the lower layers of the skin." [HPO:probinson]
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 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
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 HP:0200037 skin vesicle "A circumscribed, fluid-containing, epidermal elevation generally considered less than 10mm in diameter at the widest point." [HPO:SKOEHLER]
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 HP:0200097 Oral mucusa blisters 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000177697 CD151 / P48509 / CD151 molecule (Raph blood group)  / complex / reaction
 ENSG00000091409 ITGA6 / P23229 / integrin subunit alpha 6  / reaction / complex
 ENSG00000196878 LAMB3 / Q13751 / laminin subunit beta 3  / reaction / complex
 ENSG00000132470 ITGB4 / P16144 / integrin subunit beta 4  / reaction / complex
 ENSG00000178209 PLEC / Q15149 / plectin  / reaction / complex
 ENSG00000058085 LAMC2 / Q13753 / laminin subunit gamma 2  / reaction / complex
 ENSG00000186081 KRT5 / P13647 / keratin 5  / -
 ENSG00000065618 Q9UMD9 / COL17A1 / collagen type XVII alpha 1 chain  / complex / reaction
 ENSG00000053747 LAMA3 / Q16787 / laminin subunit alpha 3  / reaction / complex






 

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