ENSG00000170465


Homo sapiens

Features
Gene ID: ENSG00000170465
  
Biological name :KRT6C
  
Synonyms : keratin 6C / KRT6C / P48668
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: -1
Band: q13.13
Gene start: 52468516
Gene end: 52473785
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSP00000252250
NCBI entrez gene - 286887     See in Manteia.
OMIM - 612315
RefSeq - NM_173086
RefSeq Peptide - NP_775109
swissprot - P48668
Ensembl - ENSG00000170465
  
Related genetic diseases (OMIM): 615735 - Palmoplantar keratoderma, nonepidermolytic, focal or diffuse, 615735
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 krt4ENSDARG00000017624Danio rerio
 krt5ENSDARG00000058371Danio rerio
 krt8ENSDARG00000058358Danio rerio
 zgc:158846ENSDARG00000058462Danio rerio
 ENSGALG00000043689Gallus gallus
 KRT5ENSGALG00000032672Gallus gallus
 KRT6AENSGALG00000030629Gallus gallus
 KRT75ENSGALG00000035972Gallus gallus
 Gm5414ENSMUSG00000064232Mus musculus
 Gm5478ENSMUSG00000095241Mus musculus
 Krt6aENSMUSG00000058354Mus musculus
 Krt6bENSMUSG00000023041Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
KRT6B / P04259 / keratin 6BENSG0000018547999
KRT6A / P02538 / keratin 6AENSG0000020542098
KRT5 / P13647 / keratin 5ENSG0000018608179
KRT75 / O95678 / keratin 75ENSG0000017045471
KRT3 / P12035 / keratin 3ENSG0000018644266
KRT1 / P04264 / keratin 1ENSG0000016776864
KRT76 / Q01546 / keratin 76ENSG0000018506964
KRT79 / Q5XKE5 / keratin 79ENSG0000018564060
KRT4 / P19013 / keratin 4ENSG0000017047757
KRT71 / Q3SY84 / keratin 71ENSG0000013964854
KRT7 / P08729 / keratin 7ENSG0000013548053
KRT8 / P05787 / keratin 8ENSG0000017042153


Protein motifs (from Interpro)
Interpro ID Name
 IPR001664  Intermediate filament protein
 IPR003054  Keratin, type II
 IPR018039  Intermediate filament protein, conserved site
 IPR032444  Keratin type II head


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0031424 keratinization TAS
 biological_processGO:0045104 intermediate filament cytoskeleton organization IMP
 biological_processGO:0070268 cornification TAS
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005882 intermediate filament NAS
 cellular_componentGO:0045095 keratin filament IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005198 structural molecule activity IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Keratinization
Formation of the cornified envelope


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000982 Palmoplantar keratoderma 
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 HP:0025092 Epidermal acanthosis "Diffuse hypertrophy or thickening of the stratum spinosum of the epidermis (prickle cell layer of the skin)." []
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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