ENSG00000185479


Homo sapiens

Features
Gene ID: ENSG00000185479
  
Biological name :KRT6B
  
Synonyms : keratin 6B / KRT6B / P04259
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: -1
Band: q13.13
Gene start: 52446651
Gene end: 52452126
  
Corresponding Affymetrix probe sets: 209126_x_at (Human Genome U133 Plus 2.0 Array)   213680_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000252252
NCBI entrez gene - 3854     See in Manteia.
OMIM - 148042
RefSeq - NM_005555
RefSeq Peptide - NP_005546
swissprot - P04259
Ensembl - ENSG00000185479
  
Related genetic diseases (OMIM): 615728 - Pachyonychia congenita 4, 615728
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 krt4ENSDARG00000017624Danio rerio
 krt5ENSDARG00000058371Danio rerio
 krt8ENSDARG00000058358Danio rerio
 zgc:158846ENSDARG00000058462Danio rerio
 ENSGALG00000043689Gallus gallus
 KRT5ENSGALG00000032672Gallus gallus
 KRT6AENSGALG00000030629Gallus gallus
 KRT75ENSGALG00000035972Gallus gallus
 Gm5414ENSMUSG00000064232Mus musculus
 Gm5478ENSMUSG00000095241Mus musculus
 Krt6aENSMUSG00000058354Mus musculus
 Krt6bENSMUSG00000023041Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
KRT6A / P02538 / keratin 6AENSG0000020542099
KRT6C / P48668 / keratin 6CENSG0000017046599
KRT5 / P13647 / keratin 5ENSG0000018608180
KRT75 / O95678 / keratin 75ENSG0000017045471
KRT3 / P12035 / keratin 3ENSG0000018644266
KRT1 / P04264 / keratin 1ENSG0000016776864
KRT76 / Q01546 / keratin 76ENSG0000018506964
KRT79 / Q5XKE5 / keratin 79ENSG0000018564061
KRT4 / P19013 / keratin 4ENSG0000017047758
KRT71 / Q3SY84 / keratin 71ENSG0000013964855
KRT7 / P08729 / keratin 7ENSG0000013548054
KRT8 / P05787 / keratin 8ENSG0000017042153


Protein motifs (from Interpro)
Interpro ID Name
 IPR001664  Intermediate filament protein
 IPR003054  Keratin, type II
 IPR018039  Intermediate filament protein, conserved site
 IPR032444  Keratin type II head


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007010 cytoskeleton organization IEA
 biological_processGO:0007398 ectoderm development TAS
 biological_processGO:0031424 keratinization TAS
 biological_processGO:0070268 cornification TAS
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005882 intermediate filament IEA
 cellular_componentGO:0045095 keratin filament IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005198 structural molecule activity IEA
 molecular_functionGO:0005200 structural constituent of cytoskeleton TAS
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Keratinization
Formation of the cornified envelope


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
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 HP:0000670 Carious teeth 
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 HP:0000975 Hyperhidrosis "An abnormally increased perspiration." [HPO:probinson]
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 HP:0000982 Palmoplantar keratoderma 
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 HP:0001131 Corneal dystrophy 
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 HP:0001231 Abnormality of the fingernails "An abnormality of the `fingernails` (FMA:54327)." [HPO:probinson]
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 HP:0001596 Alopecia "Loss of hair from the head or body." [HPO:curators]
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 HP:0001601 Laryngomalacia 
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 HP:0001798 Anonychia "Total absence of nails." [HPO:curators]
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 HP:0001805 Thickened nails 
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 HP:0002093 Respiratory insufficiency 
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0002745 Oral leukoplakia 
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 HP:0008064 Ichthyosiform abnormality of the skin 
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 HP:0008066 Abnormal blistering of the skin 
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 HP:0008404 Nail dystrophy, variable 
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 HP:0012035 Steatocystoma multiplex "Multiple, localized or widespread, asymptomatic or inflammatory dermal cysts involving the pilosebaceous units. Lesions can appear anywhere on the body, but steatocystoma multiplex is more commonly involved with those areas of the skin with a high density of developed pilosebaceous units (e.g., the axilla, groin, neck, and proximal extremities)." [HPO:probinson, pmid:20631281]
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 HP:0100543 Cognitive impairment "Abnormality in the process of thought including the ability to process information." [HPO:sdoelken]
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 HP:0100643 Abnormality of the nail colour 
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 HP:0200035 skin plaques "A broad papule, or confluence of papules equal to or greater than 10 mm. Has also been defined as an elevated, plateau-like lesion that is greater in its diameter than in its depth." [HPO:SKOEHLER]
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 HP:0200040 Skin cysts "The presence of one or more `cysts` (MPATH:62) of the `skin` (FMA:7163)." [HPO:skoehler]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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