ENSG00000167768


Homo sapiens

Features
Gene ID: ENSG00000167768
  
Biological name :KRT1
  
Synonyms : keratin 1 / KRT1 / P04264
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: -1
Band: q13.13
Gene start: 52674736
Gene end: 52680407
  
Corresponding Affymetrix probe sets: 205900_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000252244
NCBI entrez gene - 3848     See in Manteia.
OMIM - 139350
RefSeq - NM_006121
RefSeq Peptide - NP_006112
swissprot - P04264
Ensembl - ENSG00000167768
  
Related genetic diseases (OMIM): 113800 - Epidermolytic hyperkeratosis, 113800
  146590 - Ichthyosis histrix, Curth-Macklin type, 146590
  607602 - Ichthyosis, cyclic, with epidermolytic hyperkeratosis, 607602
  607654 - Keratosis palmoplantaris striata III, 607654
  144200 - Palmoplantar keratoderma, epidermolytic, 144200
  600962 - Palmoplantar keratoderma, nonepidermolytic, 600962
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 krt4ENSDARG00000017624Danio rerio
 krt5ENSDARG00000058371Danio rerio
 krt8ENSDARG00000058358Danio rerio
 zgc:158846ENSDARG00000058462Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
KRT3 / P12035 / keratin 3ENSG0000018644260
KRT5 / P13647 / keratin 5ENSG0000018608159
KRT76 / Q01546 / keratin 76ENSG0000018506957
KRT6C / P48668 / keratin 6CENSG0000017046556
KRT6A / P02538 / keratin 6AENSG0000020542056
KRT6B / P04259 / keratin 6BENSG0000018547956
KRT75 / O95678 / keratin 75ENSG0000017045452
KRT4 / P19013 / keratin 4ENSG0000017047751
KRT79 / Q5XKE5 / keratin 79ENSG0000018564050
KRT71 / Q3SY84 / keratin 71ENSG0000013964848
KRT8 / P05787 / keratin 8ENSG0000017042143
KRT7 / P08729 / keratin 7ENSG0000013548040


Protein motifs (from Interpro)
Interpro ID Name
 IPR001664  Intermediate filament protein
 IPR003054  Keratin, type II
 IPR018039  Intermediate filament protein, conserved site
 IPR032444  Keratin type II head
 IPR032449  Keratin type II cytoskeletal 1, tail


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001867 complement activation, lectin pathway IPI
 biological_processGO:0001895 retina homeostasis HEP
 biological_processGO:0006979 response to oxidative stress NAS
 biological_processGO:0018149 peptide cross-linking IDA
 biological_processGO:0031424 keratinization TAS
 biological_processGO:0042730 fibrinolysis NAS
 biological_processGO:0043312 neutrophil degranulation TAS
 biological_processGO:0045765 regulation of angiogenesis NAS
 biological_processGO:0070268 cornification TAS
 cellular_componentGO:0001533 cornified envelope IDA
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0005615 extracellular space HDA
 cellular_componentGO:0005634 nucleus HDA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005856 cytoskeleton TAS
 cellular_componentGO:0005882 intermediate filament IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031012 extracellular matrix HDA
 cellular_componentGO:0045095 keratin filament IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 cellular_componentGO:0072562 blood microparticle HDA
 cellular_componentGO:1904813 ficolin-1-rich granule lumen TAS
 molecular_functionGO:0005198 structural molecule activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0030246 carbohydrate binding IPI
 molecular_functionGO:0030280 structural constituent of epidermis IDA


Pathways (from Reactome)
Pathway description
Neutrophil degranulation
Keratinization
Formation of the cornified envelope


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000964 Eczema "Eczema is a form of dermatitis. The term eczema is broadly applied to a range of persistent skin conditions and can be related to a number of underlying conditions. Manifestations of eczema can include dryness and recurring skin rashes with redness, skin edema, itching and dryness, crusting, flaking, blistering, cracking, oozing, or bleeding." [HPO:curators]
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 HP:0000972 Palmoplantar hyperkeratosis "`Hyperkeratosis` (HP:0000962) affecting the palm of the hand and the sole of the foot." [HPO:probinson]
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 HP:0000975 Hyperhidrosis "An abnormally increased perspiration." [HPO:probinson]
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 HP:0000982 Palmoplantar keratoderma 
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 HP:0000992 Photosensitivity "An increased sensitivity of the skin to light. Photosensitivity may result in a rash upon exposure to the sun (which is known as photodermatosis). Photosensitivity can be diagnosed by phototests in which light is shone on small areas of skin." [HPO:curators]
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 HP:0001019 Erythroderma "An inflammatory exfoliative dermatosis involving nearly all of the surface of the skin. Erythroderma develops suddenly. A patchy erythema may generalize and spread to affect most of the skin. Scaling may appear in 2-6 days and be accompanied by hot, red, dry skin, malaise, and fever." [HPO:probinson]
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 HP:0001231 Abnormality of the fingernails "An abnormality of the `fingernails` (FMA:54327)." [HPO:probinson]
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 HP:0001371 Contractures 
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 HP:0001581 Recurrent skin infections "Infections of the skin that happen multiple times." [HPO:curators]
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 HP:0001595 Hair abnormality 
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 HP:0001597 Abnormality of the nails "Abnormality of the fingernails or toenails." [HPO:curators]
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 HP:0001824 Weight loss 
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 HP:0001939 Metabolism abnormality 
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 HP:0003212 Increased IgE level "An abnormally increased level of immunoglobulin E in blood." [HPO:probinson]
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 HP:0004396 Poor appetite 
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 HP:0007404 Nonepidermolytic palmoplantar keratoderma 
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 HP:0007435 Diffuse palmoplantar keratoderma 
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 HP:0007460 Autoamputation of digits 
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 HP:0007475 Epidermolytic hyperkeratosis 
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 HP:0007559 Localized epidermolytic hyperkeratosis 
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 HP:0008064 Ichthyosiform abnormality of the skin 
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 HP:0008066 Abnormal blistering of the skin 
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 HP:0008404 Nail dystrophy, variable 
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 HP:0010783 Erythema "Redness of the skin, caused by hyperemia of the capillaries in the lower layers of the skin." [HPO:probinson]
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 HP:0011889 Bleeding with minor or no trauma "Significant bleeding or hemorrhage without significant precipitating factor." [DDD:kfreson]
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 HP:0025092 Epidermal acanthosis "Diffuse hypertrophy or thickening of the stratum spinosum of the epidermis (prickle cell layer of the skin)." []
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 HP:0040189 Scaling skin "Refers to the loss of the outer layer of the epidermis in large, scale-like flakes." []
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 HP:0100780 Conjunctival hamartomas 
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 HP:0200042 skin ulcer "A discontinuity of the skin exhibiting complete loss of the epidermis and often portions of the dermis and even subcutaneous fat." [HPO:SKOEHLER]
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 HP:0200043 verrucae "Benign growths on the skin or mucous membranes that cause cosmetic problems as well as pain and discomfort. Warts most often occur on the hands, feet, and genital areas." [HPO:SKOEHLER]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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