ENSG00000178209


Homo sapiens

Features
Gene ID: ENSG00000178209
  
Biological name :PLEC
  
Synonyms : PLEC / plectin / Q15149
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 8
Strand: -1
Band: q24.3
Gene start: 143915147
Gene end: 143976734
  
Corresponding Affymetrix probe sets: 201373_at (Human Genome U133 Plus 2.0 Array)   216971_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000433982
Ensembl peptide - ENSP00000433557
Ensembl peptide - ENSP00000434490
Ensembl peptide - ENSP00000437303
Ensembl peptide - ENSP00000436702
Ensembl peptide - ENSP00000434583
Ensembl peptide - ENSP00000323856
Ensembl peptide - ENSP00000344848
Ensembl peptide - ENSP00000346602
Ensembl peptide - ENSP00000347044
Ensembl peptide - ENSP00000348702
Ensembl peptide - ENSP00000350277
Ensembl peptide - ENSP00000381756
Ensembl peptide - ENSP00000388180
NCBI entrez gene - 5339     See in Manteia.
OMIM - 601282
RefSeq - XM_011517132
RefSeq - NM_201384
RefSeq - XM_005250976
RefSeq - XM_005250978
RefSeq - XM_005250979
RefSeq - XM_005250980
RefSeq - XM_005250981
RefSeq - XM_005250982
RefSeq - XM_005250983
RefSeq - XM_005250984
RefSeq - XM_006716588
RefSeq - XM_006716589
RefSeq - XM_006716590
RefSeq - XM_011517130
RefSeq - XM_011517131
RefSeq - NM_000445
RefSeq - NM_201378
RefSeq - NM_201379
RefSeq - NM_201380
RefSeq - NM_201381
RefSeq - NM_201382
RefSeq - NM_201383
RefSeq Peptide - NP_958780
RefSeq Peptide - NP_958782
RefSeq Peptide - NP_958783
RefSeq Peptide - NP_958784
RefSeq Peptide - NP_958785
RefSeq Peptide - NP_958786
RefSeq Peptide - NP_000436
RefSeq Peptide - NP_958781
swissprot - E9PMV1
swissprot - E9PKG0
swissprot - H0YDN1
swissprot - Q15149
swissprot - E9PIA2
swissprot - E9PQ28
Ensembl - ENSG00000178209
  
Related genetic diseases (OMIM): 616487 - ?Epidermolysis bullosa simplex with nail dystrophy, 616487
  226670 - Epidermolysis bullosa simplex with muscular dystrophy, 226670
  612138 - Epidermolysis bullosa simplex with pyloric atresia, 612138
  131950 - Epidermolysis bullosa simplex, Ogna type, 131950
  613723 - Muscular dystrophy, limb-girdle, type 2Q, 613723
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 plecaENSDARG00000062590Danio rerio
 plecbENSDARG00000021987Danio rerio
 PlecENSMUSG00000022565Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
DST / Q03001 / dystoninENSG0000015191422
MACF1 / Q9UPN3 / microtubule-actin crosslinking factor 1ENSG0000012760322
DSP / P15924 / desmoplakinENSG0000009669621
EVPL / Q92817 / envoplakinENSG0000016788011
EPPK1 / epiplakin 1ENSG0000026115011
PPL / O60437 / periplakinENSG000001188988
EVPLL / A8MZ36 / envoplakin likeENSG000002148601


Protein motifs (from Interpro)
Interpro ID Name
 IPR001101  Plectin repeat
 IPR001589  Actinin-type actin-binding domain, conserved site
 IPR001715  Calponin homology domain
 IPR005326  Plectin/S10, N-terminal
 IPR018159  Spectrin/alpha-actinin
 IPR030269  Plectin
 IPR035915  Plakin repeat superfamily
 IPR036872  CH domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0031581 hemidesmosome assembly IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005886 plasma membrane NAS
 cellular_componentGO:0005903 brush border IEA
 cellular_componentGO:0005925 focal adhesion HDA
 cellular_componentGO:0016528 sarcoplasm ISS
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0030056 hemidesmosome IEA
 cellular_componentGO:0042383 sarcolemma IDA
 cellular_componentGO:0043034 costamere TAS
 cellular_componentGO:0043292 contractile fiber IEA
 cellular_componentGO:0045111 intermediate filament cytoskeleton IDA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0008092 cytoskeletal protein binding IEA
 molecular_functionGO:0008307 structural constituent of muscle TAS
 molecular_functionGO:0030506 ankyrin binding IPI
 molecular_functionGO:0045296 cadherin binding IDA


Pathways (from Reactome)
Pathway description
Assembly of collagen fibrils and other multimeric structures
Caspase-mediated cleavage of cytoskeletal proteins
Type I hemidesmosome assembly


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000070 Ureterocele 
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 HP:0000096 Glomerulosclerosis 
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 HP:0000110 Renal dysplasia 
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 HP:0000119 Genitourinary abnormality "The presence of any abnormality of the genitourinary system." [HPO:curators]
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 HP:0000126 Hydronephrosis 
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 HP:0000430 Hypoplastic nasal alae "Thinned, deficient, or excessively arched `ala nasi` (FMA:59519)." [pmid:19152422]
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 HP:0000490 Deep set eyes 
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 HP:0000491 Keratitis "Inflammation of the cornea." [HPO:curators]
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 HP:0000508 Ptosis "Drooping of the eyelid." [HPO:curators]
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 HP:0000602 Ophthalmoplegia 
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 HP:0000656 Ectropion "An abnormal turning outward of the lower eyelid." [HPO:sdoelken]
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 HP:0000670 Carious teeth 
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 HP:0000682 Abnormality of dental enamel "An abnormality of the dental enamel, which is the external layer of the teeth, being a highly mineralized substance consisting primarily of hydroxylapatite." [HPO:curators]
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 HP:0000972 Palmoplantar hyperkeratosis "`Hyperkeratosis` (HP:0000962) affecting the palm of the hand and the sole of the foot." [HPO:probinson]
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 HP:0000978 Ecchymoses 
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 HP:0001030 Fragile skin 
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 HP:0001056 Milia 
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 HP:0001057 Aplasia cutis congenita "A developmental defect resulting in the congenital absence of skin in multiple or solitary non-inflammatory, well-demarcated, oval or circular ulcers with a diameter of about 1 to 2 cm. Aplasia cutis congenita most commonly occurs on the scalp, but may present in the face, trunk, or limbs." [HPO:curators]
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 HP:0001060 Axillary pterygia 
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 HP:0001075 Atrophic scars 
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 HP:0001270 Motor retardation 
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 HP:0001371 Contractures 
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 HP:0001376 Decreased mobility of joints 
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 HP:0001508 Failure to thrive 
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 HP:0001522 Death in infancy 
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 HP:0001561 Polyhydramnios 
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 HP:0001596 Alopecia "Loss of hair from the head or body." [HPO:curators]
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 HP:0001622 Premature birth 
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 HP:0001798 Anonychia "Total absence of nails." [HPO:curators]
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 HP:0001804 Hypoplastic fingernails "Underdeveloped fingernails." [HPO:curators]
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 HP:0001805 Thickened nails 
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 HP:0001812 Hyperconvex fingernails 
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 HP:0001903 Anemia 
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 HP:0001944 Dehydration 
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 HP:0002015 Dysphagia "Difficulty in swallowing." [HPO:curators]
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 HP:0002032 Esophageal atresia "A developmental defect resulting in complete obliteration of the lumen of the esophagus such that the esophagus ends in a blind pouch rather than connecting to the stomach." [HPO:curators]
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 HP:0002041 Intractable diarrhea 
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 HP:0002164 Nail dysplasia 
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 HP:0002300 Mutism 
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 HP:0002357 Dysphasia 
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 HP:0002381 Aphasia 
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 HP:0002577 Abnormality of the stomach "An abnormality of the stomach, i.e., the hollow, muscular organ of the gastrointestinal tract between the esophagus and the small intestine." [HPO:curators]
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 HP:0002643 Neonatal respiratory distress 
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 HP:0002804 Arthrogryposis multiplex congenita 
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 HP:0002938 Lumbar hyperlordosis 
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 HP:0003198 Myopathy 
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 HP:0003202 Amyotrophy "The presence of muscular atrophy (which is also known as amyotrophy)." [HPO:curators]
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 HP:0003236 Elevated serum creatine phosphokinase 
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 HP:0003324 Generalized muscle weakness "Generalized weakness or decreased strength of the muscles." [HPO:curators]
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 HP:0003341 Skin cleavage in the lamina lucida 
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 HP:0003391 Gower sign "A phenomen whereby patients are not able to stand up without the use of the hands owing to weakness of the proximal muscles of the lower limbs." [HPO:probinson]
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 HP:0003473 Mild-moderate fatigable weakness of limb muscles 
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 HP:0003551 Difficulty climbing stairs 
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 HP:0003560 Muscular dystrophy "The term dystrophy means abnormal growth. However, muscular dystrophy is used to describe primary myopathies with a genetic basis and a progressive course characterized by progressive skeletal muscle weakness, defects in muscle proteins, and the apoptosis of muscle cells." [HPO:curators]
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 HP:0003577 Onset at birth 
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 HP:0003678 Rapidly progressive 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0004334 Dermal atrophy "Partial or complete wasting (atrophy) of the skin." [HPO:curators]
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 HP:0004399 Congenital pyloric atresia 
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 HP:0004552 scarring alopecia of scalp 
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 HP:0005984 Elevated maternal serum alpha-fetoprotein "An elevation of alpha-feto protein in the maternal serum." [HPO:curators]
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 HP:0006297 Hypoplastic dental enamel 
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 HP:0007556 Plantar hyperkeratosis "`Hyperkeratosis` (HP:0000962) affecting the sole of the foot." [HPO:probinson]
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 HP:0007585 Skin fragility with non-scarring blistering 
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 HP:0008066 Abnormal blistering of the skin 
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 HP:0008401 Onychogryposis of toenails 
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 HP:0008404 Nail dystrophy, variable 
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 HP:0008551 Underdeveloped ears 
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 HP:0009025 Increased connective tissue "The presence of an abnormally increased amount of connective tissue." [HPO:curators]
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 HP:0010477 Aplasia of the bladder "Absence of the urinary bladder." [HPO:curators]
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 HP:0010529 Echolalia "The tendency to repeat vocalizations made by another person." [HPO:curators]
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 HP:0010547 Muscle flaccidity "A type of paralysis in which a muscle becomes soft and yields to passive stretching, which results from loss of all or practically all peripheral motor nerves that innervated the muscle. Muscle tone is reduced and the affected muscles undergo extreme atrophy within months of the loss of innervation." [HPO:curators]
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 HP:0011859 Punctate keratitis "A type of keratitis characterized by inflammation in pinpoint areas of the corneal epithelium." [HPO:probinson]
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 HP:0012227 Urethral stricture "Narrowing of the urethra associated with inflammation or scar tissue." [HPO:probinson]
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 HP:0012246 Oculomotor nerve palsy "Reduced ability to control the movement of the eye associated with damage to the third cranial nerve (the oculomotor nerve)." [HPO:probinson]
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 HP:0012378 Fatigue "A subjective feeling of tiredness characterized by a lack of energy and motivation." [HPO:probinson]
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 HP:0100806 Sepsis 
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 HP:0200034 skin papules "A circumscribed, solid elevation of skin with no visible fluid, varying in size from a pinhead to less than 10mm in diameter at the widest point." [HPO:SKOEHLER]
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 HP:0200037 skin vesicle "A circumscribed, fluid-containing, epidermal elevation generally considered less than 10mm in diameter at the widest point." [HPO:SKOEHLER]
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 HP:0200041 skin erosion "A discontinuity of the skin exhibiting incomplete loss of the epidermis, a lesion that is moist, circumscribed, and usually depressed." [HPO:SKOEHLER]
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 HP:0200097 Oral mucusa blisters 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000186847 KRT14 / P02533 / keratin 14  / complex / reaction
 ENSG00000132470 ITGB4 / P16144 / integrin subunit beta 4  / reaction / complex
 ENSG00000186081 KRT5 / P13647 / keratin 5  / complex / reaction
 ENSG00000091409 ITGA6 / P23229 / integrin subunit alpha 6  / reaction / complex
 ENSG00000064012 CASP8 / Q14790 / caspase 8  / reaction
 ENSG00000058085 LAMC2 / Q13753 / laminin subunit gamma 2  / complex / reaction
 ENSG00000053747 LAMA3 / Q16787 / laminin subunit alpha 3  / reaction / complex
 ENSG00000065618 Q9UMD9 / COL17A1 / collagen type XVII alpha 1 chain  / complex / reaction
 ENSG00000151914 DST / Q03001 / dystonin  / complex
 ENSG00000177697 CD151 / P48509 / CD151 molecule (Raph blood group)  / reaction / complex
 ENSG00000196878 LAMB3 / Q13751 / laminin subunit beta 3  / reaction / complex






 

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