ENSMUSG00000053119


Mus musculus

Features
Gene ID: ENSMUSG00000053119
  
Biological name :Chmp3
  
Synonyms : Chmp3 / Mus musculus charged multivesicular body protein 3 (Chmp3), transcript variant 3, mRNA. / Q9CQ10
  
Possible biological names infered from orthology : charged multivesicular body protein 3 / Q9Y3E7 / RNF103-CHMP3 / RNF103-CHMP3 readthrough
  
Species: Mus musculus
  
Chr. number: 6
Strand: 1
Band: C1
Gene start: 71543797
Gene end: 71582609
  
Corresponding Affymetrix probe sets: 10539008 (MoGene1.0st)   1428165_at (Mouse Genome 430 2.0 Array)   1453564_a_at (Mouse Genome 430 2.0 Array)   1459584_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000144867
Ensembl peptide - ENSMUSP00000145223
Ensembl peptide - ENSMUSP00000144985
Ensembl peptide - ENSMUSP00000068410
Ensembl peptide - ENSMUSP00000109815
NCBI entrez gene - 66700     See in Manteia.
MGI - MGI:1913950
RefSeq - XM_006506481
RefSeq - XM_006506480
RefSeq - XM_006506482
RefSeq - NM_001355675
RefSeq - NM_025783
RefSeq - XM_017321713
RefSeq Peptide - NP_080059
RefSeq Peptide - NP_001342604
swissprot - Q9CQ10
swissprot - A0A0N4SVS3
swissprot - A0A0N4SUX9
swissprot - A0A0N4SV76
Ensembl - ENSMUSG00000053119
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 chmp3ENSDARG00000038064Danio rerio
 ENSGALG00000015805Gallus gallus
 CHMP3ENSG00000115561Homo sapiens
 RNF103-CHMP3ENSG00000249884Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005024  Snf7 family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000920 cell separation after cytokinesis ISO
 biological_processGO:0007034 vacuolar transport IEA
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0008333 endosome to lysosome transport IEA
 biological_processGO:0010824 regulation of centrosome duplication ISO
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0032467 positive regulation of cytokinesis IEA
 biological_processGO:0039702 viral budding via host ESCRT complex ISO
 biological_processGO:0050792 regulation of viral process ISO
 biological_processGO:0051036 regulation of endosome size IEA
 biological_processGO:0051258 protein polymerization ISO
 biological_processGO:0051291 protein heterooligomerization ISO
 biological_processGO:0051301 cell division IEA
 biological_processGO:0061763 multivesicular body-lysosome fusion ISO
 biological_processGO:1902187 negative regulation of viral release from host cell ISO
 biological_processGO:1902188 positive regulation of viral release from host cell ISO
 biological_processGO:2000641 regulation of early endosome to late endosome transport ISO
 cellular_componentGO:0000815 ESCRT III complex ISO
 cellular_componentGO:0005622 intracellular ISO
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005769 early endosome IEA
 cellular_componentGO:0005770 late endosome ISO
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005886 plasma membrane ISO
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030496 midbody IEA
 cellular_componentGO:0031410 cytoplasmic vesicle ISO
 cellular_componentGO:0031902 late endosome membrane IEA
 molecular_functionGO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEA
 molecular_functionGO:0031210 phosphatidylcholine binding ISO
 molecular_functionGO:0042802 identical protein binding ISO
 molecular_functionGO:0042803 protein homodimerization activity ISO
 molecular_functionGO:1990381 ubiquitin-specific protease binding ISO


Pathways (from Reactome)
Pathway description
Macroautophagy
Endosomal Sorting Complex Required For Transport (ESCRT)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0011100 complete preweaning lethality "death of all organisms of a given genotype in a population between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
Show

Allelic Composition: Pofut2tm2.2Bch/Pofut2tm2.2Bch
Genetic Background: B6.Cg-Pofut2tm2.2Bch

 MP:0013292 embryonic lethality prior to organogenesis "death prior to the completion of embryo turning (Mus: E9-9.5)" [MGI:smb]
Show

Allelic Composition: Pofut2tm2.2Bch/Pofut2tm2.2Bch
Genetic Background: B6.Cg-Pofut2tm2.2Bch

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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