ENSMUSG00000056116


Mus musculus

Features
Gene ID: ENSMUSG00000056116
  
Biological name :H2-T22
  
Synonyms : H2-T22 / histocompatibility 2, T region locus 22
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 17
Strand: -1
Band: B1
Gene start: 36037128
Gene end: 36042747
  
Corresponding Affymetrix probe sets: 10450694 (MoGene1.0st)   10608650 (MoGene1.0st)   10608680 (MoGene1.0st)   1439121_at (Mouse Genome 430 2.0 Array)   1449875_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000077111
Ensembl peptide - ENSMUSP00000056041
Ensembl peptide - ENSMUSP00000078927
Ensembl peptide - ENSMUSP00000134019
NCBI entrez gene - 15051     See in Manteia.
NCBI entrez gene - 15039     See in Manteia.
MGI - MGI:95956
RefSeq - XM_017317264
RefSeq - NM_010397
RefSeq - NM_010399
RefSeq - XM_006523701
RefSeq - XM_006523702
RefSeq Peptide - NP_034529
RefSeq Peptide - NP_001334311
RefSeq Peptide - NP_034527
swissprot - Q31615
swissprot - Q9BCZ1
swissprot - G3UYB6
Ensembl - ENSMUSG00000056116
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CR339041.1ENSDARG00000051710Danio rerio
 CR339041.2ENSDARG00000051711Danio rerio
 CR339041.3ENSDARG00000115781Danio rerio
 FO904903.1ENSDARG00000059039Danio rerio
 mhc1laaENSDARG00000016056Danio rerio
 mhc1lbaENSDARG00000016227Danio rerio
 mhc1ldaENSDARG00000023203Danio rerio
 mhc1lfaENSDARG00000051712Danio rerio
 mhc1lgaENSDARG00000051713Danio rerio
 mhc1liaENSDARG00000097766Danio rerio
 mhc1ljaENSDARG00000096830Danio rerio
 mhc1llaENSDARG00000096977Danio rerio
 mhc1ubaENSDARG00000075963Danio rerio
 mhc1ukaENSDARG00000092731Danio rerio
 mhc1umaENSDARG00000039164Danio rerio
 si:ch211-147g22.4ENSDARG00000097275Danio rerio
 si:dkey-225f5.5ENSDARG00000055813Danio rerio
 si:dkey-52p2.5ENSDARG00000096940Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
H2-T10 / histocompatibility 2, T region locus 10ENSMUSG0000007949194
H2-M10.3ENSMUSG0000005812439
H2-M10.1ENSMUSG0000002444838
H2-M10.2 / histocompatibility 2, M region locus 10.2ENSMUSG0000002308338
H2-M10.4ENSMUSG0000004823137
H2-M10.5ENSMUSG0000003724637
H2-M10.6 / histocompatibility 2, M region locus 10.6ENSMUSG0000003713036
H2-T24ENSMUSG0000005383533
Mr1 / Q8HWB0 / major histocompatibility complex, class I-related / Q95460*ENSMUSG0000002647126
Hfe / P70387 / Hereditary hemochromatosis protein homolog / Q30201* / hemochromatosis*ENSMUSG0000000661125
Fcgrt / Q61559 / Mus musculus Fc receptor, IgG, alpha chain transporter (Fcgrt), transcript variant 2, mRNA. / P55899* / Fc fragment of IgG receptor and transporter*ENSMUSG0000000342022
Azgp1 / Q64726 / Zinc-alpha-2-glycoprotein / P25311* / alpha-2-glycoprotein 1, zinc-binding*ENSMUSG0000003705320
Mill1 / MICA* / MICB* / Q29980* / MHC class I polypeptide-related sequence A* / MHC class I polypeptide-related sequence B*ENSMUSG0000005400519
2410137M14Rik / RIKEN cDNA 2410137M14 geneENSMUSG0000006430818
Mill2 / MHC I like leukocyte 2 / MICA* / MICB* / Q29980* / MHC class I polypeptide-related sequence A* / MHC class I polypeptide-related sequence B*ENSMUSG0000004098717


Protein motifs (from Interpro)
Interpro ID Name
 IPR001039  MHC class I alpha chain, alpha1 alpha2 domains
 IPR003006  Immunoglobulin/major histocompatibility complex, conserved site
 IPR003597  Immunoglobulin C1-set
 IPR007110  Immunoglobulin-like domain
 IPR011161  MHC class I-like antigen recognition-like
 IPR011162  MHC classes I/II-like antigen recognition protein
 IPR013783  Immunoglobulin-like fold
 IPR036179  Immunoglobulin-like domain superfamily
 IPR037055  MHC class I-like antigen recognition-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002474 antigen processing and presentation of peptide antigen via MHC class I IBA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005102 signaling receptor binding IBA
 molecular_functionGO:0042605 peptide antigen binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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