Manteia

ENSDARG00000051713

Danio rerio

Features

Gene ID:	ENSDARG00000051713

Biological name :	mhc1lga

Synonyms :	major histocompatibility complex class I LGA / mhc1lga

Possible biological names infered from orthology :	2410137M14Rik / alpha-2-glycoprotein 1, zinc-binding / AZGP1 / Fc fragment of IgG receptor and transporter / FCGRT / H2-M10.1 / H2-M10.2 / H2-M10.3 / H2-M10.4 / H2-M10.5 / H2-M10.6 / H2-T10 / H2-T22 / H2-T24 / hemochromatosis / Hereditary hemochromatosis protein homolog / HFE / histocompatibility 2, M region locus 10.2 / histocompatibility 2, M region locus 10.6 / histocompatibility 2, T region locus 10 / histocompatibility 2, T region locus 22 / major histocompatibility complex, class I-related / MHC class I polypeptide-related sequence A / MHC class I polypeptide-related sequence B / MHC I like leukocyte 2 / MICA / MICB / Mill1 / Mill2 / MR1 / Mus musculus Fc receptor, IgG, alpha chain transporter (Fcgrt), transcript variant 2, mRNA. / P25311 / P55899 / P70387 / Q29980 / Q30201 / Q61559 / Q64726 / Q8HWB0 / Q95460 / RIKEN cDNA 2410137M14 gene / Zinc-alpha-2-glycoprotein

Species:	Danio rerio

Chr. number:	25
Strand:	1
Band:
Gene start:	11002640
Gene end:	11006571

Corresponding Affymetrix probe sets:

Cross references:	Ensembl peptide - ENSDARP00000067874 Ensembl peptide - ENSDARP00000129611 NCBI entrez gene - 100535946 See in Manteia. RefSeq - NM_001327884 RefSeq Peptide - NP_001314813 swissprot - F1RAH2 swissprot - X1WH99 ZFIN ID - ZDB-GENE-140820-8 Ensembl - ENSDARG00000051713

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name	ID	Species
	ENSGALG00000032602	Gallus gallus
	ENSGALG00000043619	Gallus gallus
	ENSGALG00000040901	Gallus gallus
	ENSGALG00000035251	Gallus gallus
	ENSGALG00000026466	Gallus gallus
	ENSGALG00000030320	Gallus gallus
BF1	ENSGALG00000033932	Gallus gallus
BF2	ENSGALG00000041380	Gallus gallus
AZGP1	ENSG00000160862	Homo sapiens
FCGRT	ENSG00000104870	Homo sapiens
HFE	ENSG00000010704	Homo sapiens
MICA	ENSG00000204520	Homo sapiens
MICB	ENSG00000204516	Homo sapiens
MR1	ENSG00000153029	Homo sapiens
2410137M14Rik	ENSMUSG00000064308	Mus musculus
Azgp1	ENSMUSG00000037053	Mus musculus
Fcgrt	ENSMUSG00000003420	Mus musculus
H2-M10.1	ENSMUSG00000024448	Mus musculus
H2-M10.2	ENSMUSG00000023083	Mus musculus
H2-M10.3	ENSMUSG00000058124	Mus musculus
H2-M10.4	ENSMUSG00000048231	Mus musculus
H2-M10.5	ENSMUSG00000037246	Mus musculus
H2-M10.6	ENSMUSG00000037130	Mus musculus
H2-T10	ENSMUSG00000079491	Mus musculus
H2-T22	ENSMUSG00000056116	Mus musculus
H2-T24	ENSMUSG00000053835	Mus musculus
Hfe	ENSMUSG00000006611	Mus musculus
Mill1	ENSMUSG00000054005	Mus musculus
Mill2	ENSMUSG00000040987	Mus musculus
Mr1	ENSMUSG00000026471	Mus musculus

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
mhc1lfa / major histocompatibility complex class I LFA / HFE* / MR1* / MICB* / MICA* / FCGRT* / Mill1* / Mill2* / AZGP1* / P25311* / H2-T10* / H2-T22* / H2-T24* / P55899* / P70387* / Q29980...	ENSDARG00000051712	61
mhc1lda / major histocompatibility complex class I LDA / HFE* / MR1* / MICB* / MICA* / FCGRT* / Mill1* / Mill2* / AZGP1* / P25311* / H2-T10* / H2-T22* / H2-T24* / P55899* / P70387* / Q29980...	ENSDARG00000023203	57
mhc1lja / major histocompatibility complex class I LJA / HFE* / MR1* / MICB* / MICA* / FCGRT* / Mill1* / Mill2* / AZGP1* / P25311* / H2-T10* / H2-T22* / H2-T24* / P55899* / P70387* / Q29980...	ENSDARG00000096830	57
CR339041.2 / MR1* / HFE* / MICA* / MICB* / FCGRT* / AZGP1* / P55899* / Q29980* / P25311* / Q30201* / Q95460* / hemochromatosis* / alpha-2-glycoprotein 1, zinc-binding* / MHC class I polypep...	ENSDARG00000051711	53
mhc1lla / si:dkey-52p2.5 / major histocompatibility complex class I LLA / MR1* / HFE* / MICB* / MICA* / Mill2* / FCGRT* / AZGP1* / Mill1* / P25311* / Q95460* / Q8HWB0* / H2-T10* / H2-T22* /...	ENSDARG00000096977	48
CR339041.1 / MR1* / HFE* / MICA* / MICB* / FCGRT* / AZGP1* / P55899* / Q29980* / P25311* / Q30201* / Q95460* / hemochromatosis* / alpha-2-glycoprotein 1, zinc-binding* / MHC class I polypep...	ENSDARG00000051710	48
si:dkey-52p2.5 / MR1* / HFE* / MICA* / MICB* / Mill2* / Mill1* / AZGP1* / FCGRT* / P55899* / H2-T10* / H2-T22* / H2-T24* / P25311* / P70387* / Q29980* / Q30201* / Q61559* / Q64726* / Q8HWB0...	ENSDARG00000096940	46
mhc1lia / major histocompatibility complex class I LIA / HFE* / MR1* / MICB* / MICA* / FCGRT* / Mill1* / Mill2* / AZGP1* / P25311* / H2-T10* / H2-T22* / H2-T24* / P55899* / P70387* / Q29980...	ENSDARG00000097766	43
mhc1laa / major histocompatibility complex class I LAA / HFE* / MR1* / MICB* / MICA* / FCGRT* / Mill1* / Mill2* / AZGP1* / P25311* / H2-T10* / H2-T22* / H2-T24* / P55899* / P70387* / Q29980...	ENSDARG00000016056	38
CR339041.3 / MR1* / HFE* / MICB* / MICA* / AZGP1* / FCGRT* / Mill1* / Mill2* / Q8HWB0* / Q30201* / Q29980* / P70387* / P55899* / P25311* / Q95460* / H2-T10* / H2-T22* / H2-T24* / Q64726* / ...	ENSDARG00000115781	37
si:dkey-225f5.5 / MR1* / HFE* / MICA* / MICB* / Mill2* / Mill1* / AZGP1* / FCGRT* / P55899* / H2-T10* / H2-T22* / H2-T24* / P25311* / P70387* / Q29980* / Q30201* / Q61559* / Q64726* / Q8HWB...	ENSDARG00000055813	35
si:ch211-147g22.4 / MR1* / HFE* / MICA* / MICB* / Mill2* / Mill1* / AZGP1* / FCGRT* / P55899* / H2-T10* / H2-T22* / H2-T24* / P25311* / P70387* / Q29980* / Q30201* / Q61559* / Q64726* / Q8H...	ENSDARG00000097275	34
mhc1lba / major histocompatibility complex class I LBA / MR1* / HFE* / MICA* / MICB* / FCGRT* / AZGP1* / P55899* / Q29980* / P25311* / Q95460* / Q30201* / hemochromatosis* / alpha-2-glycopr...	ENSDARG00000016227	34
mhc1uba / major histocompatibility complex class I UBA / MR1* / HFE* / MICA* / MICB* / Mill1* / Mill2* / FCGRT* / AZGP1* / H2-T22* / H2-T24* / Q61559* / Q30201* / Q29980* / P70387* / P55899...	ENSDARG00000075963	20
mhc1uka / major histocompatibility complex class I UKA / MR1* / HFE* / MICA* / MICB* / Mill1* / Mill2* / FCGRT* / AZGP1* / H2-T22* / H2-T24* / Q61559* / Q30201* / Q29980* / P70387* / P55899...	ENSDARG00000092731	20
FO904903.1 / Danio rerio major histocompatibility complex class I ULA (mhc1ula), mRNA. / HFE* / MR1* / MICA* / MICB* / FCGRT* / AZGP1* / P25311* / Q95460* / Q30201* / Q29980* / P55899* / he...	ENSDARG00000059039	20
mhc1zfa / major histocompatibility complex class I ZFA	ENSDARG00000088022	18
mhc1zja / major histocompatibility complex class I ZJA	ENSDARG00000074765	17
mhc1zba / major histocompatibility complex class I ZBA	ENSDARG00000036588	17
mhc1zea / major histocompatibility complex class I ZEA	ENSDARG00000001470	16

Protein motifs (from Interpro)

Interpro ID	Name
IPR003597	Immunoglobulin C1-set
IPR007110	Immunoglobulin-like domain
IPR011161	MHC class I-like antigen recognition-like
IPR011162	MHC classes I/II-like antigen recognition protein
IPR013783	Immunoglobulin-like fold

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
cellular_component	GO:0005886	plasma membrane	IBA
cellular_component	GO:0016020	membrane	IEA
cellular_component	GO:0016021	integral component of membrane	IEA

Pathways (from Reactome)

Pathway description

Transferrin endocytosis and recycling

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr