ENSG00000010704


Homo sapiens

Features
Gene ID: ENSG00000010704
  
Biological name :HFE
  
Synonyms : hemochromatosis / HFE / Q30201
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: 1
Band: p22.2
Gene start: 26087281
Gene end: 26098343
  
Corresponding Affymetrix probe sets: 1553402_a_at (Human Genome U133 Plus 2.0 Array)   206086_x_at (Human Genome U133 Plus 2.0 Array)   206087_x_at (Human Genome U133 Plus 2.0 Array)   210864_x_at (Human Genome U133 Plus 2.0 Array)   211326_x_at (Human Genome U133 Plus 2.0 Array)   211327_x_at (Human Genome U133 Plus 2.0 Array)   211328_x_at (Human Genome U133 Plus 2.0 Array)   211329_x_at (Human Genome U133 Plus 2.0 Array)   211330_s_at (Human Genome U133 Plus 2.0 Array)   211331_x_at (Human Genome U133 Plus 2.0 Array)   211332_x_at (Human Genome U133 Plus 2.0 Array)   211863_x_at (Human Genome U133 Plus 2.0 Array)   211866_x_at (Human Genome U133 Plus 2.0 Array)   214647_s_at (Human Genome U133 Plus 2.0 Array)   235754_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000420802
Ensembl peptide - ENSP00000419725
Ensembl peptide - ENSP00000420559
Ensembl peptide - ENSP00000259699
Ensembl peptide - ENSP00000311698
Ensembl peptide - ENSP00000312342
Ensembl peptide - ENSP00000313776
Ensembl peptide - ENSP00000315936
Ensembl peptide - ENSP00000337819
Ensembl peptide - ENSP00000380217
Ensembl peptide - ENSP00000417404
Ensembl peptide - ENSP00000417534
NCBI entrez gene - 3077     See in Manteia.
OMIM - 613609
RefSeq - XM_011514543
RefSeq - NM_000410
RefSeq - NM_001300749
RefSeq - NM_139003
RefSeq - NM_139004
RefSeq - NM_139006
RefSeq - NM_139007
RefSeq - NM_139008
RefSeq - NM_139009
RefSeq - NM_139010
RefSeq - NM_139011
RefSeq Peptide - NP_620579
RefSeq Peptide - NP_620580
RefSeq Peptide - NP_001287678
RefSeq Peptide - NP_620572
RefSeq Peptide - NP_000401
RefSeq Peptide - NP_620573
RefSeq Peptide - NP_620575
RefSeq Peptide - NP_620576
RefSeq Peptide - NP_620577
RefSeq Peptide - NP_620578
swissprot - Q6B0J5
swissprot - H7C4K4
swissprot - Q30201
swissprot - F8W7W8
Ensembl - ENSG00000010704
  
Related genetic diseases (OMIM): 235200 - Hemochromatosis, 235200
  614193 - [Transferrin serum level QTL2], 614193
  104300 - {Alzheimer disease, susceptibility to}, 104300
  612635 - {Microvascular complications of diabetes 7}, 612635
  176100 - {Porphyria cutanea tarda, susceptibility to}, 176100
  176200 - {Porphyria variegata, susceptibility to}, 176200
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CR339041.1ENSDARG00000051710Danio rerio
 CR339041.2ENSDARG00000051711Danio rerio
 CR339041.3ENSDARG00000115781Danio rerio
 FO904903.1ENSDARG00000059039Danio rerio
 mhc1laaENSDARG00000016056Danio rerio
 mhc1lbaENSDARG00000016227Danio rerio
 mhc1ldaENSDARG00000023203Danio rerio
 mhc1lfaENSDARG00000051712Danio rerio
 mhc1lgaENSDARG00000051713Danio rerio
 mhc1liaENSDARG00000097766Danio rerio
 mhc1ljaENSDARG00000096830Danio rerio
 mhc1llaENSDARG00000096977Danio rerio
 mhc1ubaENSDARG00000075963Danio rerio
 mhc1ukaENSDARG00000092731Danio rerio
 mhc1umaENSDARG00000039164Danio rerio
 si:ch211-147g22.4ENSDARG00000097275Danio rerio
 si:dkey-225f5.5ENSDARG00000055813Danio rerio
 si:dkey-52p2.5ENSDARG00000096940Danio rerio
 HfeENSMUSG00000006611Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MR1 / Q95460 / major histocompatibility complex, class I-relatedENSG0000015302932
AZGP1 / P25311 / alpha-2-glycoprotein 1, zinc-bindingENSG0000016086231
MICB / Q29980 / MHC class I polypeptide-related sequence BENSG0000020451627
FCGRT / P55899 / Fc fragment of IgG receptor and transporterENSG0000010487026
MICA / MHC class I polypeptide-related sequence AENSG0000020452024


Protein motifs (from Interpro)
Interpro ID Name
 IPR001039  MHC class I alpha chain, alpha1 alpha2 domains
 IPR003006  Immunoglobulin/major histocompatibility complex, conserved site
 IPR003597  Immunoglobulin C1-set
 IPR007110  Immunoglobulin-like domain
 IPR011161  MHC class I-like antigen recognition-like
 IPR011162  MHC classes I/II-like antigen recognition protein
 IPR013783  Immunoglobulin-like fold
 IPR031092  Hereditary hemochromatosis protein
 IPR036179  Immunoglobulin-like domain superfamily
 IPR037055  MHC class I-like antigen recognition-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002626 negative regulation of T cell antigen processing and presentation IEA
 biological_processGO:0002725 negative regulation of T cell cytokine production IGI
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006879 cellular iron ion homeostasis IEA
 biological_processGO:0006953 acute-phase response IEA
 biological_processGO:0007565 female pregnancy IEA
 biological_processGO:0010039 response to iron ion IMP
 biological_processGO:0010106 cellular response to iron ion starvation IEA
 biological_processGO:0010628 positive regulation of gene expression ISS
 biological_processGO:0010862 positive regulation of pathway-restricted SMAD protein phosphorylation IDA
 biological_processGO:0030509 BMP signaling pathway IDA
 biological_processGO:0032092 positive regulation of protein binding IGI
 biological_processGO:0032435 negative regulation of proteasomal ubiquitin-dependent protein catabolic process IC
 biological_processGO:0033572 transferrin transport TAS
 biological_processGO:0042446 hormone biosynthetic process IEA
 biological_processGO:0048260 positive regulation of receptor-mediated endocytosis IGI
 biological_processGO:0055072 iron ion homeostasis IMP
 biological_processGO:0060586 multicellular organismal iron ion homeostasis IEA
 biological_processGO:0065003 protein-containing complex assembly TAS
 biological_processGO:0071281 cellular response to iron ion IGI
 biological_processGO:0090277 positive regulation of peptide hormone secretion IMP
 biological_processGO:0097421 liver regeneration IEA
 biological_processGO:0098711 iron ion import across plasma membrane IEA
 biological_processGO:1900121 negative regulation of receptor binding IDA
 biological_processGO:1900122 positive regulation of receptor binding IGI
 biological_processGO:1900390 regulation of iron ion import IGI
 biological_processGO:1904283 negative regulation of antigen processing and presentation of endogenous peptide antigen via MHC class I IGI
 biological_processGO:1904434 positive regulation of ferrous iron binding IGI
 biological_processGO:1904437 positive regulation of transferrin receptor binding IGI
 biological_processGO:1990641 response to iron ion starvation IEA
 biological_processGO:2000008 regulation of protein localization to cell surface IMP
 biological_processGO:2000059 negative regulation of ubiquitin-dependent protein catabolic process IDA
 biological_processGO:2000272 negative regulation of signaling receptor activity IDA
 biological_processGO:2000273 positive regulation of signaling receptor activity IGI
 biological_processGO:2001186 negative regulation of CD8-positive, alpha-beta T cell activation IGI
 cellular_componentGO:0005615 extracellular space IDA
 cellular_componentGO:0005769 early endosome IDA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005887 integral component of plasma membrane TAS
 cellular_componentGO:0009897 external side of plasma membrane IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IDA
 cellular_componentGO:0045177 apical part of cell IDA
 cellular_componentGO:0045178 basal part of cell IDA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IDA
 cellular_componentGO:0055037 recycling endosome IDA
 cellular_componentGO:1990357 terminal web IEA
 cellular_componentGO:1990712 HFE-transferrin receptor complex IEA
 molecular_functionGO:0005102 signaling receptor binding IPI
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0030881 beta-2-microglobulin binding IPI
 molecular_functionGO:0039706 co-receptor binding IPI
 molecular_functionGO:1990459 transferrin receptor binding IEA


Pathways (from Reactome)
Pathway description
Transferrin endocytosis and recycling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000027 Azoospermia 
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 HP:0000029 Testicular atrophy 
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 HP:0000044 Hypogonadotrophic hypogonadism "Hypogonadotropic hypogonadism is characterized by reduced function of the gonads (testes in males or ovaries in females) and results from the absence of the gonadal stimulating pituitary hormones: follicle stimulating hormone (FSH) and luteinizing hormone (LH)." [HPO:curators]
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 HP:0000135 Hypogonadism "Reduced function of the gonads (testes in males or ovaries in females)." [HPO:curators]
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 HP:0000141 Amenorrhea 
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 HP:0000488 Retinopathy 
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 HP:0000771 Gynecomastia 
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 HP:0000802 Impotence 
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 HP:0000819 Diabetes mellitus 
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 HP:0000864 Abnormality of the hypothalamus-pituitary axis 
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 HP:0000934 Chondrocalcinosis 
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 HP:0000939 Osteoporosis "Osteoporosis is a systemic skeletal disease characterized by low bone density and microarchitectural deterioration of bone tissue with a consequent increase in bone fragility. According to the WHO, osteoporosis is characterized by a value of BMD 2.5 standard deviations or more below the young adult mean." [HPO:curators]
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 HP:0000953 Hyperpigmentation 
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 HP:0001009 Telangiectasia "Telangiectasias refer to small dilated blood vessels located near the surface of the skin or mucous membranes, measuring between 0.5 and 1 millimeter in diameter." [HPO:curators]
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 HP:0001373 Joint dislocation "Displacement or malalignment of joints." [HPO:curators]
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 HP:0001376 Decreased mobility of joints 
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 HP:0001394 Cirrhosis 
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 HP:0001396 Cholestasis 
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 HP:0001397 Hepatic steatosis 
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 HP:0001402 Hepatocellular carcinoma 
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 HP:0001541 Ascites 
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 HP:0001596 Alopecia "Loss of hair from the head or body." [HPO:curators]
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 HP:0001635 Congestive heart failure "The presence of an abnormality of cardiac function that is responsible for the failure of the heart to pump blood at a rate that is commensurate with the needs of the tissues or a state in which abnormally elevated filling pressures are required for the heart to do so. Heart failure is frequently related to a defect in myocardial contraction." [HPO:curators]
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 HP:0001638 Cardiomyopathy 
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 HP:0001640 Cardiomegaly 
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 HP:0001738 Exocrine pancreatic insufficiency 
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 HP:0001744 Splenomegaly "An abnormal enlargement of the spleen." [HPO:curators]
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 HP:0001952 Abnormal glucose tolerance 
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 HP:0002027 Abdominal pain 
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 HP:0002202 Pleural effusion "The presence of an excessive amount of fluid in the pleural cavity." [HPO:curators]
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0002321 Vertigo "An abnormal sensation of spinning while the body is actually stationary." [HPO:curators]
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 HP:0002829 Arthralgia 
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 HP:0002910 Elevated transaminases "Elevations of the levels of SGOT and SGPT in the serum. SGOT (serum glutamic oxaloacetic transaminase) and SGPT (serum glutamic pyruvic transaminase) are transaminases primarily found in the liver and heart and are released into the bloodstream as the result of liver or heart damage. SGOT and SGPT are used clinically mainly as markers of liver damage." [HPO:curators]
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 HP:0003040 Arthropathy 
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 HP:0003281 Increased serum ferritin 
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 HP:0003452 Increased serum iron 
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 HP:0009830 Peripheral neuropathy "Peripheral neuropathy is a general term for any disorder of the peripheral nervous system. The main clinical features used to classify peripheral neuropathy are distribution, type (mainly demyelinating versus mainly axonal), duration, and course." [HPO:curators]
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 HP:0011675 Arrhythmia "Any cardiac rhythm other than the normal sinus rhythm. Such a rhythm may be either of sinus or ectopic origin and either regular or irregular. An arrhythmia may be due to a disturbance in impulse formation or conduction or both." [DDD:dbrown, pmid:19063792]
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 HP:0012378 Fatigue "A subjective feeling of tiredness characterized by a lack of energy and motivation." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000072274 TFRC / P02786 / transferrin receptor  / reaction / complex






 

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