ENSMUSG00000062488


Mus musculus

Features
Gene ID: ENSMUSG00000062488
  
Biological name :Ifit3b
  
Synonyms : Ifit3b
  
Possible biological names infered from orthology : IFIT3 / interferon induced protein with tetratricopeptide repeats 3 / O14879
  
Species: Mus musculus
  
Chr. number: 19
Strand: 1
Band: C1
Gene start: 34607970
Gene end: 34613401
  
Corresponding Affymetrix probe sets: 10462621 (MoGene1.0st)   1449025_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000075599
NCBI entrez gene - 667370     See in Manteia.
MGI - MGI:3698419
RefSeq - NM_001005858
RefSeq Peptide - NP_001005858
swissprot - E9PV48
Ensembl - ENSMUSG00000062488
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CR759879.1ENSDARG00000088069Danio rerio
 ifit10ENSDARG00000007467Danio rerio
 ifit11ENSDARG00000090537Danio rerio
 ifit12ENSDARG00000090977Danio rerio
 ifit14ENSDARG00000071012Danio rerio
 ifit15ENSDARG00000043584Danio rerio
 ifit16ENSDARG00000056976Danio rerio
 ifit8ENSDARG00000057173Danio rerio
 IFIT5ENSGALG00000045085Gallus gallus
 IFIT3ENSG00000119917Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Ifit3 / Q64345 / Interferon-induced protein with tetratricopeptide repeats 3 / O14879*ENSMUSG0000007489699
Ifit2 / Mus musculus interferon-induced protein with tetratricopeptide repeats 2 (Ifit2), transcript variant 2, mRNA. / P09913* / interferon induced protein with tetratricopeptide repeats 2*ENSMUSG0000004593245
Ifit1 / Q64282 / Interferon-induced protein with tetratricopeptide repeats 1 / Q5T764* / IFIT1B* / interferon induced protein with tetratricopeptide repeats 1B*ENSMUSG0000003445935
Ifit1bl2 / interferon induced protein with tetratricopeptide repeats 1B like 2 / IFIT1B* / Q5T764* / interferon induced protein with tetratricopeptide repeats 1B*ENSMUSG0000006729734
Ifit1bl1 / interferon induced protein with tetratricpeptide repeats 1B like 1 / IFIT1B* / Q5T764* / interferon induced protein with tetratricopeptide repeats 1B*ENSMUSG0000007933934


Protein motifs (from Interpro)
Interpro ID Name
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR019734  Tetratricopeptide repeat
 IPR024122  Interferon-induced protein with tetratricopeptide repeats 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0035457 cellular response to interferon-alpha IEA
 biological_processGO:0051607 defense response to virus IBA
 cellular_componentGO:0005737 cytoplasm ISO
 cellular_componentGO:0005739 mitochondrion ISO
 cellular_componentGO:0005829 cytosol ISO
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0042802 identical protein binding ISO


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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