ENSMUSG00000090035


Mus musculus

Features
Gene ID: ENSMUSG00000090035
  
Biological name :Galnt4
  
Synonyms : Galnt4 / O08832 / Polypeptide N-acetylgalactosaminyltransferase 4
  
Possible biological names infered from orthology : POC1B-GALNT4 / POC1B-GALNT4 readthrough / Q8N4A0
  
Species: Mus musculus
  
Chr. number: 10
Strand: 1
Band: C3
Gene start: 99108159
Gene end: 99113247
  
Corresponding Affymetrix probe sets: 10366038 (MoGene1.0st)   1423637_at (Mouse Genome 430 2.0 Array)   1423638_at (Mouse Genome 430 2.0 Array)   1455915_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000125315
NCBI entrez gene - 14426     See in Manteia.
MGI - MGI:894692
RefSeq - NM_015737
RefSeq Peptide - NP_056552
swissprot - O08832
Ensembl - ENSMUSG00000090035
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 poc1blENSDARG00000012745Danio rerio
 GALNT4ENSG00000257594Homo sapiens
 POC1B-GALNT4ENSG00000259075Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8BGT9 / Galnt12 / Polypeptide N-acetylgalactosaminyltransferase 12 / Q8IXK2*ENSMUSG0000003977454
Galnt3 / P70419 / Polypeptide N-acetylgalactosaminyltransferase 3 / Q14435*ENSMUSG0000002699445
Galnt6 / Q8C7U7 / Polypeptide N-acetylgalactosaminyltransferase 6 / Q8NCL4*ENSMUSG0000003728044
Galnt1 / O08912 / Polypeptide N-acetylgalactosaminyltransferase 1 Polypeptide N-acetylgalactosaminyltransferase 1 soluble form / Q10472* / polypeptide N-acetylgalactosaminyltransferase 1*ENSMUSG0000000042041
Q8CF93 / Galnt13 / Polypeptide N-acetylgalactosaminyltransferase 13 / Q8IUC8*ENSMUSG0000006098841
Q921L8 / Galnt11 / Polypeptide N-acetylgalactosaminyltransferase 11 / Q8NCW6*ENSMUSG0000003807236
Galnt2 / Q6PB93 / Polypeptide N-acetylgalactosaminyltransferase 2 Polypeptide N-acetylgalactosaminyltransferase 2 soluble form / Q10471* / polypeptide N-acetylgalactosaminyltransferase 2*ENSMUSG0000008970436
Galnt5 / Q8C102 / Polypeptide N-acetylgalactosaminyltransferase 5 / Q7Z7M9*ENSMUSG0000002682836
Q8BVG5 / Galnt14 / Polypeptide N-acetylgalactosaminyltransferase 14 / Q96FL9*ENSMUSG0000002406435
Q6PB93 / Gm20388 / predicted gene 20388 / GALNT2* / Q10471* / polypeptide N-acetylgalactosaminyltransferase 2*ENSMUSG0000009232935
Q9JJ61 / Galnt16 / Polypeptide N-acetylgalactosaminyltransferase 16 / Q8N428*ENSMUSG0000002113034
Q9D4M9 / Galntl5 / Inactive polypeptide N-acetylgalactosaminyltransferase-like protein 5 / Q7Z4T8* / polypeptide N-acetylgalactosaminyltransferase like 5*ENSMUSG0000002893829


Protein motifs (from Interpro)
Interpro ID Name
 IPR000772  Ricin B, lectin domain
 IPR001173  Glycosyltransferase 2-like
 IPR029044  Nucleotide-diphospho-sugar transferases
 IPR035992  Ricin B-like lectins


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006486 protein glycosylation IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005794 Golgi apparatus ISO
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm ISO
 molecular_functionGO:0004653 polypeptide N-acetylgalactosaminyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0030246 carbohydrate binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
O-linked glycosylation of mucins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Ikbkbtm2Cgn/Ikbkbtm2Cgn,Tg(Cd4-cre)1Cwi/0
Genetic Background: involves: C57BL/6 * DBA/2

Allelic Composition: Galnt4tm1Tabk/Galnt4tm1Tabk,Galnt5tm1Tabk/Galnt5tm1Tabk
Genetic Background: B6;129S-Galnt5tm1Tabk Galnt4tm1Tabk/Mmucd

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr