ENSMUSG00000090639


Mus musculus

Features
Gene ID: ENSMUSG00000090639
  
Biological name :Gm20425
  
Synonyms : Gm20425
  
Possible biological names infered from orthology : P02787 / TF / transferrin
  
Species: Mus musculus
  
Chr. number: 9
Strand: -1
Band: F1
Gene start: 103190208
Gene end: 103230307
  
Corresponding Affymetrix probe sets: 10596137 (MoGene1.0st)   10596148 (MoGene1.0st)   1425348_a_at (Mouse Genome 430 2.0 Array)   1425546_a_at (Mouse Genome 430 2.0 Array)   1450089_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000127808
MGI - MGI:5141890
swissprot - E9Q035
Ensembl - ENSMUSG00000090639
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tfaENSDARG00000016771Danio rerio
 TFENSGALG00000006453Gallus gallus
 TFENSG00000091513Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Trf / Q921I1 / Serotransferrin / TF* / P02787* / transferrin*ENSMUSG0000003255469
Q9DBD0 / 1300017J02Rik / RIKEN cDNA 1300017J02 geneENSMUSG0000003368840
Ltf / P08071 / Lactotransferrin / P02788*ENSMUSG0000003249638
Srprb / P47758 / Signal recognition particle receptor subunit beta ENSMUSG0000003255328
Meltf / Q9R0R1 / Melanotransferrin / P08582*ENSMUSG0000002278027


Protein motifs (from Interpro)
Interpro ID Name
 IPR001156  Transferrin-like domain
 IPR018195  Transferrin family, iron binding site
 IPR019009  Signal recognition particle receptor, beta subunit
 IPR024156  Small GTPase superfamily, ARF type
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005785 signal recognition particle receptor complex IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005047 signal recognition particle binding IBA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
Platelet degranulation
Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)
Cargo recognition for clathrin-mediated endocytosis
Clathrin-mediated endocytosis
Post-translational protein phosphorylation
Iron uptake and transport
Transferrin endocytosis and recycling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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