ENSDARG00000000189


Danio rerio

Features
Gene ID: ENSDARG00000000189
  
Biological name :sema6e
  
Synonyms : sema6e / sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E
  
Possible biological names infered from orthology : Q9H3T2 / Q9WTM3 / SEMA6C / sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C / semaphorin 6C
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 30002605
Gene end: 30271444
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000118170
Ensembl peptide - ENSDARP00000137144
Ensembl peptide - ENSDARP00000000198
NCBI entrez gene - 556743     See in Manteia.
RefSeq - NM_001199365
RefSeq Peptide - NP_001186294
swissprot - E3W9A6
swissprot - F1QMU2
ZFIN ID - ZDB-GENE-040724-119
Ensembl - ENSDARG00000000189
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SEMA6CENSGALG00000045312Gallus gallus
 Q9H3T2ENSG00000143434Homo sapiens
 Q9WTM3ENSMUSG00000038777Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sema6d / sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D / Q9WTM3* / SEMA6C* / Q9H3T2* / semaphorin 6C* / sema domain, transmembrane domain (TM), and cytopla...ENSDARG0000000274850
sema6dl / sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D, like / SEMA6D* / Q76KF0* / Q8NFY4* / semaphorin 6D*ENSDARG0000001153343
sema6ba / sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Ba / Q9H3T3* / SEMA6B* / O54951* / semaphorin 6B* / sema domain, transmembrane domain (TM), and cytop...ENSDARG0000003662629
sema6bb / sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Bb / Q9H3T3* / SEMA6B* / O54951* / semaphorin 6B* / sema domain, transmembrane domain (TM), and cytop...ENSDARG0000006197627
sema5ba / sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5Ba / SEMA5B* / Q60519* / Q9P283* / semaphorin 5B*ENSDARG0000006147122
sema5a / sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A / Q13591* / semaphorin 5A*ENSDARG0000005882121
sema5bb / sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5Bb / SEMA5B* / Q60519* / Q9P283* / semaphorin 5B*ENSDARG0000007564821
sema7a / semaphorin 7A / O75326* / Q9QUR8* / semaphorin 7A (John Milton Hagen blood group)*ENSDARG0000007870713
si:ch211-113g11.6ENSDARG0000007044210


Protein motifs (from Interpro)
Interpro ID Name
 IPR001627  Sema domain
 IPR002165  Plexin repeat
 IPR015514  Semaphorin 6C
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR027231  Semaphorin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0050919 negative chemotaxis IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0045499 chemorepellent activity IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr