ENSDARG00000000837


Danio rerio
domainsortingproteinvesiclesnx9anexinmitotictransportendocytosismembranecytoplasmicshphoxhomologousfamilywasp-bindingnexin-cellcyclecytokinesisintracellularphosphatidylinositolbindinggolgiassociatedbiogenesisclathrin-mediated

Features
Gene ID: ENSDARG00000000837
  
Biological name :snx9a
  
Synonyms : snx9a / sorting nexin 9a
  
Possible biological names infered from orthology : Q91VH2 / Q9Y5X1 / SNX9 / sorting nexin 9
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 33158294
Gene end: 33201840
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000095249
NCBI entrez gene - 368424     See in Manteia.
RefSeq - NM_001012313
RefSeq Peptide - NP_001012313
swissprot - Q7ZZB1
ZFIN ID - ZDB-GENE-030616-66
Ensembl - ENSDARG00000000837
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SNX9ENSGALG00000013710Gallus gallus
 SNX9ENSG00000130340Homo sapiens
 Snx9ENSMUSG00000002365Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
snx9b / sorting nexin 9b / SNX9* / Q9Y5X1* / Q91VH2* / sorting nexin 9*ENSDARG0000006930267
snx18b / sorting nexin 18b / SNX18* / Q96RF0* / sorting nexin 18*ENSDARG0000004424635
snx18a / sorting nexin 18a / SNX18* / Q96RF0* / sorting nexin 18*ENSDARG0000006771334
snx33 / sorting nexin 33 / Q4VAA7* / Q8WV41*ENSDARG0000001495433


Protein motifs (from Interpro)
Interpro ID Name
 IPR001452  SH3 domain
 IPR001683  Phox homologous domain
 IPR014536  Sorting nexin 9 family
 IPR019497  Sorting nexin protein, WASP-binding domain
 IPR028644  Sorting nexin-9


Gene Ontology (GO)
cell cyclecell divisionmacromolecule localizationestablishment of localizationcellular localizationcell cyclecell divisionmacromolecule localizationestablishment of localizationcellular localizationcell cyclecell divisionmacromolecule localizationestablishment of localizationcellular localizationcell cyclecell divisionmacromolecule localizationestablishment of localizationcellular localizationcell cyclecell divisionmacromolecule localizationestablishment of localizationcellular localizationcell cyclecell divisionmacromolecule localizationestablishment of localizationcellular localizationcell cyclecell divisionmacromolecule localizationestablishment of localizationcellular localizationcell cyclecell divisionmacromolecule localizationestablishment of localizationcellular localizationcell cyclecell divisionmacromolecule localizationestablishment of localizationcellular localizationcell cyclecell divisionmacromolecule localizationestablishment of localizationcellular localizationcell cyclecell cyclecell divisioncell divisionmacromolecule localizationmacromolecule localizationestablishment of localizatioestablishment of localizationcellular localizationcellular localization
lipid bindingion bindinglipid bindingion bindinglipid bindingion bindinglipid bindingion bindinglipid bindingion bindinglipid bindingion bindinglipid bindingion bindinglipid bindingion bindinglipid bindingion bindinglipid bindingion bindinglipid bindinglipid bindingion bindingion binding
membranecellorganellemembranecellorganellemembranecellorganellemembranecellorganellemembranecellorganellemembranecellorganellemembranecellorganellemembranecellorganellemembranecellorganellemembranecellorganellemembranemembranecellcellorganelleorganelle
TypeGO IDTermEv.Code
 biological_processGO:0000278 mitotic cell cycle IEA
 biological_processGO:0000281 mitotic cytokinesis IEA
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0006897 endocytosis IEA
 biological_processGO:0015031 protein transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030659 cytoplasmic vesicle membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IBA
 molecular_functionGO:0035091 phosphatidylinositol binding IEA


Pathways (from Reactome)
Pathway description
Golgi Associated Vesicle Biogenesis
Clathrin-mediated endocytosis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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