ENSDARG00000014954


Danio rerio

Features
Gene ID: ENSDARG00000014954
  
Biological name :snx33
  
Synonyms : snx33 / sorting nexin 33
  
Possible biological names infered from orthology : Q4VAA7 / Q8WV41
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 6451038
Gene end: 6481191
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000006712
Ensembl peptide - ENSDARP00000120212
NCBI entrez gene - 100001421     See in Manteia.
swissprot - B5RHZ3
swissprot - Q58EF8
ZFIN ID - ZDB-GENE-041111-209
Ensembl - ENSDARG00000014954
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SNX33ENSGALG00000033110Gallus gallus
 SNX33ENSG00000173548Homo sapiens
 Snx33ENSMUSG00000032733Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
snx18a / sorting nexin 18a / SNX18* / Q96RF0* / sorting nexin 18*ENSDARG0000006771352
snx18b / sorting nexin 18b / SNX18* / Q96RF0* / sorting nexin 18*ENSDARG0000004424648
snx9a / sorting nexin 9a / SNX9* / Q9Y5X1* / Q91VH2* / sorting nexin 9*ENSDARG0000000083734
snx9b / sorting nexin 9b / SNX9* / Q9Y5X1* / Q91VH2* / sorting nexin 9*ENSDARG0000006930234


Protein motifs (from Interpro)
Interpro ID Name
 IPR001452  SH3 domain
 IPR001683  Phox homologous domain
 IPR014536  Sorting nexin 9 family
 IPR019497  Sorting nexin protein, WASP-binding domain
 IPR027267  AH/BAR domain superfamily
 IPR028642  Sorting nexin-33


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000278 mitotic cell cycle IEA
 biological_processGO:0000281 mitotic cytokinesis IEA
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0006897 endocytosis IEA
 biological_processGO:0015031 protein transport IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030659 cytoplasmic vesicle membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IBA
 molecular_functionGO:0035091 phosphatidylinositol binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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