ENSDARG00000002494


Danio rerio

Features
Gene ID: ENSDARG00000002494
  
Biological name :itgb6
  
Synonyms : integrin, beta 6 / itgb6
  
Possible biological names infered from orthology : integrin subunit beta 6 / P18564 / Q9Z0T9
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 10975012
Gene end: 11020857
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000136814
Ensembl peptide - ENSDARP00000153217
Ensembl peptide - ENSDARP00000065932
NCBI entrez gene - 100499533     See in Manteia.
RefSeq - XM_005155724
RefSeq - XM_009305860
swissprot - A0A0R4IP79
swissprot - F1QGX0
ZFIN ID - ZDB-GENE-100812-2
Ensembl - ENSDARG00000002494
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ITGB6ENSGALG00000011141Gallus gallus
 ITGB6ENSG00000115221Homo sapiens
 Itgb6ENSMUSG00000026971Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
itgb5 / integrin, beta 5 / P18084* / integrin subunit beta 5*ENSDARG0000001294245
itgb3b / integrin beta 3b / ITGB3* / P05106* / O54890* / AC068234.1* / Integrin beta-3 * / integrin subunit beta 3*ENSDARG0000004507044
itgb3a / integrin beta 3a / ITGB3* / P05106* / AC068234.1* / integrin subunit beta 3*ENSDARG0000005676743
itgb1a / integrin, beta 1a / ITGB1* / P05556* / P09055* / Integrin beta-1 * / integrin subunit beta 1*ENSDARG0000007186340
itgb1b.1 / integrin, beta 1b.1ENSDARG0000005323239
itgb2 / integrin, beta 2 / Itgb2l* / P05107* / Q3UV74* / integrin subunit beta 2* / Integrin beta-2-like protein *ENSDARG0000001693935
itgb4 / integrin, beta 4 / A2A863* / P16144* / integrin subunit beta 4*ENSDARG0000002850731
itgb7 / integrin, beta 7 / P26010* / P26011* / integrin subunit beta 7*ENSDARG0000004431831
itgb1b.1 / itgb1b.2 / integrin, beta 1b.2ENSDARG0000002268930
itgb8 / integrin, beta 8 / P26012* / integrin subunit beta 8*ENSDARG0000002822230
itgb1b / integrin, beta 1b / ITGB1* / P05556* / integrin subunit beta 1*ENSDARG0000010448425
CABZ01058721.1 / ITGB1* / P05556* / integrin subunit beta 1*ENSDARG0000010992915
itgbl1 / integrin, beta-like 1 / O95965* / Q8VDV0* / integrin subunit beta like 1* / Integrin beta-like protein 1 *ENSDARG0000004098510


Protein motifs (from Interpro)
Interpro ID Name
 IPR002035  von Willebrand factor, type A
 IPR002369  Integrin beta subunit, VWA domain
 IPR012896  Integrin beta subunit, tail
 IPR013111  EGF-like domain, extracellular
 IPR014836  Integrin beta subunit, cytoplasmic domain
 IPR015436  Integrin beta-6 subunit
 IPR015812  Integrin beta subunit
 IPR016201  PSI domain
 IPR032695  Integrin domain superfamily
 IPR033760  Integrin beta N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007160 cell-matrix adhesion IEA
 biological_processGO:0007229 integrin-mediated signaling pathway IEA
 cellular_componentGO:0008305 integrin complex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
Elastic fibre formation
Molecules associated with elastic fibres
Integrin cell surface interactions
ECM proteoglycans


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr