ENSDARG00000003904


Danio rerio

Features
Gene ID: ENSDARG00000003904
  
Biological name :sycp1
  
Synonyms : sycp1 / synaptonemal complex protein 1
  
Possible biological names infered from orthology : Q15431 / Q62209
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 49052741
Gene end: 49061086
  
Corresponding Affymetrix probe sets: Dr.15943.1.S1_at (Zebrafish Array)   Dr.18395.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000111971
Ensembl peptide - ENSDARP00000006089
NCBI entrez gene - 402797     See in Manteia.
RefSeq - NM_001118894
RefSeq Peptide - NP_001112366
swissprot - F1QYS1
swissprot - F1QEF6
ZFIN ID - ZDB-GENE-040910-6
Ensembl - ENSDARG00000003904
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SYCP1ENSGALG00000002511Gallus gallus
 SYCP1ENSG00000198765Homo sapiens
 Sycp1ENSMUSG00000027855Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR008827  Synaptonemal complex protein 1
 IPR024835  Synaptonemal complex protein 1/2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007130 synaptonemal complex assembly IEA
 cellular_componentGO:0000795 synaptonemal complex IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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