ENSGALG00000002511


Gallus gallus

Features
Gene ID: ENSGALG00000002511
  
Biological name :SYCP1
  
Synonyms : SYCP1 / synaptonemal complex protein 1
  
Possible biological names infered from orthology : Q15431 / Q62209
  
Species: Gallus gallus
  
Chr. number: 26
Strand: 1
Band:
Gene start: 3951941
Gene end: 3974291
  
Corresponding Affymetrix probe sets: GgaAffx.1664.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000003951
swissprot - E1C5U0
Ensembl - ENSGALG00000002511
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sycp1ENSDARG00000003904Danio rerio
 SYCP1ENSG00000198765Homo sapiens
 Sycp1ENSMUSG00000027855Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR008827  Synaptonemal complex protein 1
 IPR024835  Synaptonemal complex protein 1/2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000711 meiotic DNA repair synthesis IEA
 biological_processGO:0007129 synapsis IEA
 biological_processGO:0007130 synaptonemal complex assembly IEA
 biological_processGO:0007131 reciprocal meiotic recombination IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0032880 regulation of protein localization IEA
 biological_processGO:0035092 sperm chromatin condensation IEA
 biological_processGO:0051026 chiasma assembly IEA
 biological_processGO:0051878 lateral element assembly IEA
 cellular_componentGO:0000794 condensed nuclear chromosome IEA
 cellular_componentGO:0000795 synaptonemal complex IEA
 cellular_componentGO:0000801 central element IEA
 cellular_componentGO:0000802 transverse filament IEA
 cellular_componentGO:0001673 male germ cell nucleus IEA
 cellular_componentGO:0005694 chromosome IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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