Manteia

ENSDARG00000006467

Danio rerio

Features

Gene ID:	ENSDARG00000006467

Biological name :	pcdh8

Synonyms :	pcdh8 / protocadherin 8

Possible biological names infered from orthology :	O95206 / Q7TSK3

Species:	Danio rerio

Chr. number:	9
Strand:	-1
Band:
Gene start:	53654866
Gene end:	53666031

Corresponding Affymetrix probe sets:	Dr.609.1.S1_at (Zebrafish Array)

Cross references:	Ensembl peptide - ENSDARP00000112237 swissprot - F1REQ8 ZFIN ID - ZDB-GENE-980526-242 Ensembl - ENSDARG00000006467

See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name	ID	Species
PCDH8	ENSGALG00000036258	Gallus gallus
PCDH8	ENSG00000136099	Homo sapiens
Pcdh8	ENSMUSG00000036422	Mus musculus

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
PCDH8 / si:ch211-199f5.1 / O95206* / Q7TSK3* / protocadherin 8*	ENSDARG00000102185	37
pcdh18b / protocadherin 18b / Q9HCL0* / PCDH18* / Q8VHR0* / protocadherin 18*	ENSDARG00000052494	34
pcdh18a / protocadherin 18a / PCDH18* / Q9HCL0* / protocadherin 18*	ENSDARG00000089805	32
pcdh17 / protocadherin 17 / O14917*	ENSDARG00000027041	29
pcdh19 / protocadherin 19 / Q80TF3* / Q8TAB3*	ENSDARG00000034344	29
si:ch73-233f7.1	ENSDARG00000061909	29
pcdh12 / protocadherin 12 / O55134* / Q9NPG4*	ENSDARG00000076594	29
pcdh10a / protocadherin 10a / PCDH10* / Q9P2E7* / protocadherin 10*	ENSDARG00000099729	29
pcdh2g5 / pcdh2g17 / pcdh2g20 / pcdh2g28 / pcdh2g29 / pcdh2g13 / protocadherin 2 gamma 5 / Q9Y5E8* / PCDHB15* / protocadherin beta 15*	ENSDARG00000098788	28
pcdh1gb2 / protocadherin 1 gamma b 2 / Q9Y5E8* / Q91XY4* / Pcdhga3* / Pcdhga4* / Pcdhga5* / Pcdhga6* / Pcdhga7* / Pcdhga8* / PCDHB15* / Pcdhga10* / Pcdhga11* / protocadherin beta 15* / Prot...	ENSDARG00000101307	28
pcdh1gb9 / protocadherin 1 gamma b 9 / Q9Y5E8* / Q91XY4* / Pcdhga3* / Pcdhga4* / Pcdhga5* / Pcdhga6* / Pcdhga7* / Pcdhga8* / PCDHB15* / Pcdhga10* / Pcdhga11* / protocadherin beta 15* / Prot...	ENSDARG00000088475	27
pcdh2ab5 / protocadherin 2 alpha b 5 / Pcdha3* / Pcdha2* / protocadherin alpha 2* / protocadherin alpha 3*	ENSDARG00000090348	27
pcdh1a6 / pcdh1a4 / protocadherin 1 alpha 6 / Pcdha3* / Pcdha2* / protocadherin alpha 2* / protocadherin alpha 3*	ENSDARG00000097170	27
pcdh1g2 / protocadherin 1 gamma 2 / Q9Y5E8* / Q91XY4* / Pcdhga3* / Pcdhga4* / Pcdhga5* / Pcdhga6* / Pcdhga7* / Pcdhga8* / PCDHB15* / Pcdhga10* / Pcdhga11* / protocadherin beta 15* / Protoca...	ENSDARG00000101232	27
PCDHB15 / protocadherin beta 15 / Q9Y5E8*	ENSDARG00000101338	27
pcdh1g30 / protocadherin 1 gamma 30	ENSDARG00000101865	27
pcdh2ab11 / protocadherin 2 alpha b 11 / Pcdha3* / Pcdha2* / protocadherin alpha 2* / protocadherin alpha 3*	ENSDARG00000089593	26
pcdh1g31 / protocadherin 1 gamma 31	ENSDARG00000100670	25

Protein motifs (from Interpro)

Interpro ID	Name
IPR002126	Cadherin
IPR013164	Cadherin, N-terminal
IPR015919	Cadherin-like
IPR020894	Cadherin conserved site

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0007155	cell adhesion	IBA
biological_process	GO:0007156	homophilic cell adhesion via plasma membrane adhesion molecules	IEA
biological_process	GO:0007267	cell-cell signaling	IBA
biological_process	GO:0007399	nervous system development	IBA
cellular_component	GO:0005886	plasma membrane	IEA
cellular_component	GO:0005887	integral component of plasma membrane	IBA
cellular_component	GO:0016020	membrane	IEA
cellular_component	GO:0016021	integral component of membrane	IEA
molecular_function	GO:0005509	calcium ion binding	IEA

Pathways (from Reactome)

Pathway description

No match

Phenotype (from MGI, Zfin or HPO)

ID	Phenotype	Definition	Genetic BG
ZFA:0000151	pronephros	pronephros cystic , abnormal	Show

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2025 contact: otassy@igbmc.fr