ENSDARG00000007398


Danio rerio

Features
Gene ID: ENSDARG00000007398
  
Biological name :lrrk1
  
Synonyms : leucine-rich repeat kinase 1 / lrrk1
  
Possible biological names infered from orthology : Leucine-rich repeat serine/threonine-protein kinase 1 / Q38SD2 / Q3UHC2
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 9526268
Gene end: 9717020
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000033785
Ensembl peptide - ENSDARP00000106476
Ensembl peptide - ENSDARP00000154352
swissprot - E7F9S2
swissprot - E7FC40
ZFIN ID - ZDB-GENE-101019-2
Ensembl - ENSDARG00000007398
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LRRK1ENSGALG00000007141Gallus gallus
 LRRK1ENSG00000154237Homo sapiens
 Lrrk1ENSMUSG00000015133Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lrrk2 / leucine-rich repeat kinase 2 / Q5S006* / Q5S007* / Leucine-rich repeat serine/threonine-protein kinase 2 *ENSDARG0000000616922
prkd1 / protein kinase D1 / Q15139* / Q62101*ENSDARG000000759498
prkd3 / protein kinase D3 / O94806* / Q8K1Y2*ENSDARG000000799678
zgc:175248ENSDARG000001041536
prkd2 / protein kinase D2 / Q8BZ03* / Q9BZL6*ENSDARG000001046764
FO704748.1 / PRKD2* / Q9BZL6* / protein kinase D2*ENSDARG000000870182


Protein motifs (from Interpro)
Interpro ID Name
 IPR000719  Protein kinase domain
 IPR001245  Serine-threonine/tyrosine-protein kinase, catalytic domain
 IPR001611  Leucine-rich repeat
 IPR002110  Ankyrin repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR011009  Protein kinase-like domain superfamily
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR020683  Ankyrin repeat-containing domain
 IPR020859  Roc domain
 IPR025875  Leucine rich repeat 4
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR032171  C-terminal of Roc (COR) domain
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006468 protein phosphorylation IEA
 biological_processGO:0035556 intracellular signal transduction IBA
 cellular_componentGO:0005622 intracellular IBA
 molecular_functionGO:0004672 protein kinase activity IEA
 molecular_functionGO:0004871 obsolete signal transducer activity IBA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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