ENSDARG00000008491


Danio rerio

Features
Gene ID: ENSDARG00000008491
  
Biological name :si:ch211-107o10.3
  
Synonyms : si:ch211-107o10.3
  
Possible biological names infered from orthology : Q8CEE7 / Q8NBN7 / RDH13 / retinol dehydrogenase 13
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 30178253
Gene end: 30191357
  
Corresponding Affymetrix probe sets: Dr.22231.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000012436
Ensembl peptide - ENSDARP00000144006
NCBI entrez gene - 407663     See in Manteia.
RefSeq - NM_001199300
RefSeq Peptide - NP_001186229
swissprot - F1QCW3
ZFIN ID - ZDB-GENE-030131-4716
Ensembl - ENSDARG00000008491
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RDH13ENSG00000160439Homo sapiens
 Rdh13ENSMUSG00000008435Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-23o4.6 / RDH13* / Q8CEE7* / Q8NBN7* / retinol dehydrogenase 13*ENSDARG0000003457757
zgc:153441 / RDH13* / Q8CEE7* / Q8NBN7* / retinol dehydrogenase 13*ENSDARG0000005479756
rdh12 / retinol dehydrogenase 12 (all-trans/9-cis/11-cis) / RDH11* / Q9QYF1* / Q8TC12* / Q96NR8* / Q8BYK4* / Retinol dehydrogenase 12 * / Retinol dehydrogenase 11 * / retinol dehydrogenase ...ENSDARG0000001806950
rdh12l / retinol dehydrogenase 12, likeENSDARG0000004527750
rdh14b / retinol dehydrogenase 14b / RDH14* / Q9HBH5* / Q9ERI6* / retinol dehydrogenase 14*ENSDARG0000000246748
dhrs13a.3 / dehydrogenase/reductase (SDR family) member 13a, duplicate 3 / Q6UX07* / DHRS13* / Q5SS80* / dehydrogenase/reductase 13* / Dehydrogenase/reductase SDR family member 13 *ENSDARG0000004113748
zgc:112332ENSDARG0000005896648
si:dkey-94e7.2ENSDARG0000006847448
dhrs13a.1 / dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 1 / Q6UX07* / DHRS13* / Q5SS80* / dehydrogenase/reductase 13* / Dehydrogenase/reductase SDR family member 13 *ENSDARG0000002632247
dhrs13b / dehydrogenase/reductase (SDR family) member 13b / Q6UX07* / DHRS13* / Q5SS80* / dehydrogenase/reductase 13* / Dehydrogenase/reductase SDR family member 13 *ENSDARG0000003181444
rdh14a / retinol dehydrogenase 14a / RDH14* / Q9HBH5* / Q9ERI6* / retinol dehydrogenase 14*ENSDARG0000003929944
si:dkey-174n20.1ENSDARG0000003557943
si:dkey-73n8.3ENSDARG0000008920543
dhrs13l1 / dehydrogenase/reductase (SDR family) member 13 like 1 / Q6UX07* / DHRS13* / Q5SS80* / dehydrogenase/reductase 13* / Dehydrogenase/reductase SDR family member 13 *ENSDARG0000009874643
dhrs13a.2 / dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 2 / DHRS13* / Q6UX07* / dehydrogenase/reductase 13*ENSDARG0000011124043
zgc:64106ENSDARG0000001137139
dhrsx / dehydrogenase/reductase (SDR family) X-linked / Q8N5I4* / dehydrogenase/reductase X-linked*ENSDARG0000007928030
wwox / WW domain containing oxidoreductase / Q91WL8* / Q9NZC7*ENSDARG0000000761428
dhrs12 / dehydrogenase/reductase (SDR family) member 12 / A0PJE2* / dehydrogenase/reductase 12*ENSDARG0000001177025
flj13639ENSDARG0000001076424


Protein motifs (from Interpro)
Interpro ID Name
 IPR002347  Short-chain dehydrogenase/reductase SDR
 IPR016040  NAD(P)-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
RA biosynthesis pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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