ENSDARG00000054797


Danio rerio

Features
Gene ID: ENSDARG00000054797
  
Biological name :zgc:153441
  
Synonyms : zgc:153441
  
Possible biological names infered from orthology : Q8CEE7 / Q8NBN7 / RDH13 / retinol dehydrogenase 13
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 42418227
Gene end: 42424599
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000071510
NCBI entrez gene - 751745     See in Manteia.
RefSeq - NM_001045455
RefSeq Peptide - NP_001038920
swissprot - A8E7N6
ZFIN ID - ZDB-GENE-060825-39
Ensembl - ENSDARG00000054797
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RDH13ENSG00000160439Homo sapiens
 Rdh13ENSMUSG00000008435Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-23o4.6 / RDH13* / Q8CEE7* / Q8NBN7* / retinol dehydrogenase 13*ENSDARG0000003457767
si:ch211-107o10.3 / RDH13* / Q8CEE7* / Q8NBN7* / retinol dehydrogenase 13*ENSDARG0000000849154
rdh12 / retinol dehydrogenase 12 (all-trans/9-cis/11-cis) / RDH11* / Q9QYF1* / Q8TC12* / Q96NR8* / Q8BYK4* / Retinol dehydrogenase 12 * / Retinol dehydrogenase 11 * / retinol dehydrogenase ...ENSDARG0000001806948
zgc:112332ENSDARG0000005896646
dhrs13a.1 / dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 1 / Q6UX07* / DHRS13* / Q5SS80* / dehydrogenase/reductase 13* / Dehydrogenase/reductase SDR family member 13 *ENSDARG0000002632245
dhrs13a.3 / dehydrogenase/reductase (SDR family) member 13a, duplicate 3 / Q6UX07* / DHRS13* / Q5SS80* / dehydrogenase/reductase 13* / Dehydrogenase/reductase SDR family member 13 *ENSDARG0000004113745
si:dkey-73n8.3ENSDARG0000008920545
rdh14b / retinol dehydrogenase 14b / RDH14* / Q9HBH5* / Q9ERI6* / retinol dehydrogenase 14*ENSDARG0000000246744
rdh12l / retinol dehydrogenase 12, likeENSDARG0000004527744
si:dkey-94e7.2ENSDARG0000006847444
dhrs13b / dehydrogenase/reductase (SDR family) member 13b / Q6UX07* / DHRS13* / Q5SS80* / dehydrogenase/reductase 13* / Dehydrogenase/reductase SDR family member 13 *ENSDARG0000003181443
rdh14a / retinol dehydrogenase 14a / RDH14* / Q9HBH5* / Q9ERI6* / retinol dehydrogenase 14*ENSDARG0000003929943
dhrs13a.2 / dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 2 / DHRS13* / Q6UX07* / dehydrogenase/reductase 13*ENSDARG0000011124042
dhrs13l1 / dehydrogenase/reductase (SDR family) member 13 like 1 / Q6UX07* / DHRS13* / Q5SS80* / dehydrogenase/reductase 13* / Dehydrogenase/reductase SDR family member 13 *ENSDARG0000009874641
zgc:64106ENSDARG0000001137140
si:dkey-174n20.1ENSDARG0000003557938
dhrsx / dehydrogenase/reductase (SDR family) X-linked / Q8N5I4* / dehydrogenase/reductase X-linked*ENSDARG0000007928032
wwox / WW domain containing oxidoreductase / Q91WL8* / Q9NZC7*ENSDARG0000000761430
dhrs12 / dehydrogenase/reductase (SDR family) member 12 / A0PJE2* / dehydrogenase/reductase 12*ENSDARG0000001177027
flj13639ENSDARG0000001076426


Protein motifs (from Interpro)
Interpro ID Name
 IPR002347  Short-chain dehydrogenase/reductase SDR
 IPR016040  NAD(P)-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005575 cellular_component ND


Pathways (from Reactome)
Pathway description
RA biosynthesis pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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