ENSDARG00000034577


Danio rerio

Features
Gene ID: ENSDARG00000034577
  
Biological name :si:dkey-23o4.6
  
Synonyms : si:dkey-23o4.6
  
Possible biological names infered from orthology : Q8CEE7 / Q8NBN7 / RDH13 / retinol dehydrogenase 13
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 38109941
Gene end: 38118003
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000058666
NCBI entrez gene - 561542     See in Manteia.
RefSeq - XM_021473028
RefSeq - XM_684950
swissprot - E7F2K5
ZFIN ID - ZDB-GENE-100922-3
Ensembl - ENSDARG00000034577
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RDH13ENSG00000160439Homo sapiens
 Rdh13ENSMUSG00000008435Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:153441 / RDH13* / Q8CEE7* / Q8NBN7* / retinol dehydrogenase 13*ENSDARG0000005479767
si:ch211-107o10.3 / RDH13* / Q8CEE7* / Q8NBN7* / retinol dehydrogenase 13*ENSDARG0000000849155
rdh12 / retinol dehydrogenase 12 (all-trans/9-cis/11-cis) / RDH11* / Q9QYF1* / Q8TC12* / Q96NR8* / Q8BYK4* / Retinol dehydrogenase 12 * / Retinol dehydrogenase 11 * / retinol dehydrogenase ...ENSDARG0000001806947
dhrs13a.1 / dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 1 / Q6UX07* / DHRS13* / Q5SS80* / dehydrogenase/reductase 13* / Dehydrogenase/reductase SDR family member 13 *ENSDARG0000002632246
dhrs13a.3 / dehydrogenase/reductase (SDR family) member 13a, duplicate 3 / Q6UX07* / DHRS13* / Q5SS80* / dehydrogenase/reductase 13* / Dehydrogenase/reductase SDR family member 13 *ENSDARG0000004113746
dhrs13b / dehydrogenase/reductase (SDR family) member 13b / Q6UX07* / DHRS13* / Q5SS80* / dehydrogenase/reductase 13* / Dehydrogenase/reductase SDR family member 13 *ENSDARG0000003181445
rdh12l / retinol dehydrogenase 12, likeENSDARG0000004527745
si:dkey-94e7.2ENSDARG0000006847445
si:dkey-73n8.3ENSDARG0000008920545
rdh14b / retinol dehydrogenase 14b / RDH14* / Q9HBH5* / Q9ERI6* / retinol dehydrogenase 14*ENSDARG0000000246744
zgc:112332ENSDARG0000005896643
dhrs13a.2 / dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 2 / DHRS13* / Q6UX07* / dehydrogenase/reductase 13*ENSDARG0000011124043
dhrs13l1 / dehydrogenase/reductase (SDR family) member 13 like 1 / Q6UX07* / DHRS13* / Q5SS80* / dehydrogenase/reductase 13* / Dehydrogenase/reductase SDR family member 13 *ENSDARG0000009874642
rdh14a / retinol dehydrogenase 14a / RDH14* / Q9HBH5* / Q9ERI6* / retinol dehydrogenase 14*ENSDARG0000003929941
si:dkey-174n20.1ENSDARG0000003557939
zgc:64106ENSDARG0000001137137
dhrsx / dehydrogenase/reductase (SDR family) X-linked / Q8N5I4* / dehydrogenase/reductase X-linked*ENSDARG0000007928031
wwox / WW domain containing oxidoreductase / Q91WL8* / Q9NZC7*ENSDARG0000000761428
dhrs12 / dehydrogenase/reductase (SDR family) member 12 / A0PJE2* / dehydrogenase/reductase 12*ENSDARG0000001177027
si:ch211-165b10.3ENSDARG0000007697025


Protein motifs (from Interpro)
Interpro ID Name
 IPR002347  Short-chain dehydrogenase/reductase SDR
 IPR016040  NAD(P)-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
RA biosynthesis pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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