ENSDARG00000008494


Danio rerio

Features
Gene ID: ENSDARG00000008494
  
Biological name :myl6
  
Synonyms : myl6 / myosin, light chain 6, alkali, smooth muscle and non-muscle
  
Possible biological names infered from orthology : MYL6B / myosin light chain 6 / myosin light chain 6B / myosin, light polypeptide 6, alkali, smooth muscle and non-muscle / P14649 / P60660 / Q60605 / Q8CI43
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 39874177
Gene end: 39893526
  
Corresponding Affymetrix probe sets: Dr.14849.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000116624
Ensembl peptide - ENSDARP00000121212
Ensembl peptide - ENSDARP00000072128
Ensembl peptide - ENSDARP00000108226
NCBI entrez gene - 798632     See in Manteia.
RefSeq - NM_001005955
RefSeq - XM_005166077
RefSeq - XM_005166078
RefSeq Peptide - NP_001005955
swissprot - F1QWU4
swissprot - E9QB41
swissprot - E9QC87
swissprot - Q5XJ62
ZFIN ID - ZDB-GENE-041010-28
Ensembl - ENSDARG00000008494
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MYL6ENSGALG00000035086Gallus gallus
 MYL6ENSG00000092841Homo sapiens
 MYL6BENSG00000196465Homo sapiens
 Myl6ENSMUSG00000090841Mus musculus
 Myl6bENSMUSG00000039824Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
myl4 / myosin, light chain 4, alkali; atrial, embryonic / P12829* / myosin light chain 4* / Mus musculus myosin, light polypeptide 4 (Myl4), transcript variant 2, mRNA.*ENSDARG0000001151966
cmlc1 / cardiac myosin light chain-1 / MYL4* / P12829* / myosin light chain 4* / Mus musculus myosin, light polypeptide 4 (Myl4), transcript variant 2, mRNA.*ENSDARG0000003297666
zgc:153867 / MYL6* / MYL6B* / P60660* / P14649* / Q60605* / Q8CI43* / myosin light chain 6* / myosin light chain 6B* / myosin, light polypeptide 6, alkali, smooth muscle and non-muscle*ENSDARG0000003373866
myl13 / myosin, light chain 13ENSDARG0000004224565
zgc:163073 / MYL3* / P08590* / P09542* / myosin light chain 3*ENSDARG0000009971261
myl1 / myosin, light chain 1, alkali; skeletal, fast / P05977* / P05976* / myosin light chain 1* / Myosin light chain 1/3, skeletal muscle isoform *ENSDARG0000001419657
mylz3 / myosin, light polypeptide 3, skeletal muscle / MYL1* / P05977* / P05976* / myosin light chain 1* / Myosin light chain 1/3, skeletal muscle isoform *ENSDARG0000001744154


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
Smooth Muscle Contraction
RHO GTPases activate PAKs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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