ENSDARG00000014196


Danio rerio

Features
Gene ID: ENSDARG00000014196
  
Biological name :myl1
  
Synonyms : myl1 / myosin, light chain 1, alkali; skeletal, fast
  
Possible biological names infered from orthology : myosin light chain 1 / Myosin light chain 1/3, skeletal muscle isoform / P05976 / P05977
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 38994232
Gene end: 39005317
  
Corresponding Affymetrix probe sets: Dr.1448.1.S1_at (Zebrafish Array)   NM_200000_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000004932
NCBI entrez gene - 336165     See in Manteia.
RefSeq - NM_200000
RefSeq Peptide - NP_956294
swissprot - Q6P0G6
ZFIN ID - ZDB-GENE-030131-8109
Ensembl - ENSDARG00000014196
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MYL1ENSGALG00000002907Gallus gallus
 MYL1ENSG00000168530Homo sapiens
 Myl1ENSMUSG00000061816Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mylz3 / myosin, light polypeptide 3, skeletal muscle / MYL1* / P05977* / P05976* / myosin light chain 1* / Myosin light chain 1/3, skeletal muscle isoform *ENSDARG0000001744164
cmlc1 / cardiac myosin light chain-1 / MYL4* / P12829* / myosin light chain 4* / Mus musculus myosin, light polypeptide 4 (Myl4), transcript variant 2, mRNA.*ENSDARG0000003297659
myl4 / myosin, light chain 4, alkali; atrial, embryonic / P12829* / myosin light chain 4* / Mus musculus myosin, light polypeptide 4 (Myl4), transcript variant 2, mRNA.*ENSDARG0000001151958
myl13 / myosin, light chain 13ENSDARG0000004224554
zgc:163073 / MYL3* / P08590* / P09542* / myosin light chain 3*ENSDARG0000009971254
myl6 / myosin, light chain 6, alkali, smooth muscle and non-muscle / MYL6B* / Q8CI43* / P14649* / P60660* / Q60605* / myosin light chain 6* / myosin light chain 6B* / myosin, light polypept...ENSDARG0000000849449
zgc:153867 / MYL6* / MYL6B* / P60660* / P14649* / Q60605* / Q8CI43* / myosin light chain 6* / myosin light chain 6B* / myosin, light polypeptide 6, alkali, smooth muscle and non-muscle*ENSDARG0000003373849


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
Striated Muscle Contraction


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000017441 mylz3 / myosin, light polypeptide 3, skeletal muscle / MYL1* / P05977* / P05976* / myosin light chain 1* / Myosin light chain 1/3, skeletal muscle isoform *  / complex
 ENSDARG00000014196 myl1 / myosin, light chain 1, alkali; skeletal, fast / P05977* / P05976* / myosin light chain 1* / Myosin light chain 1/3, skeletal muscle isoform *  / complex
 ENSDARG00000053424 myl2b / myosin, light chain 2b, regulatory, cardiac, slow / MYL2* / P10916* / P51667* / myosin light chain 2* / Myosin regulatory light chain 2, ventricular/cardiac muscle isoform *  / complex
 ENSDARG00000104722 CABZ01076669.1 / MYL2* / P10916* / myosin light chain 2*  / complex






 

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