ENSDARG00000010018


Danio rerio

Features
Gene ID: ENSDARG00000010018
  
Biological name :qki2
  
Synonyms : Q6P104 / qki2 / QKI, KH domain containing, RNA binding 2
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 34953038
Gene end: 35019519
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000127388
Ensembl peptide - ENSDARP00000145344
Ensembl peptide - ENSDARP00000020217
Ensembl peptide - ENSDARP00000110005
Ensembl peptide - ENSDARP00000127137
NCBI entrez gene - 393815     See in Manteia.
RefSeq - NM_200842
RefSeq Peptide - NP_957136
swissprot - U3JA72
swissprot - U3JAW9
swissprot - Q6P104
swissprot - A9JTF3
ZFIN ID - ZDB-GENE-040426-1462
Ensembl - ENSDARG00000010018
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
qkib / QKI, KH domain containing, RNA binding bENSDARG0000000202687
qkia / QKI, KH domain containing, RNA binding a / Qk* / QKI* / Q9QYS9* / Q96PU8* / Protein quaking * / QKI, KH domain containing RNA binding*ENSDARG0000009747876
Q08BJ2 / khdrbs2 / KH domain containing, RNA binding, signal transduction associated 2 / Q9WU01* / Q5VWX1* / KH RNA binding domain containing, signal transduction associated 2* / KH domain-...ENSDARG0000006946930
khdrbs1a / KH domain containing, RNA binding, signal transduction associated 1a / Q07666* / Q60749* / KHDRBS1* / KH RNA binding domain containing, signal transduction associated 1* / KH dom...ENSDARG0000005285629
khdrbs1b / KH domain containing, RNA binding, signal transduction associated 1b / Q07666* / Q60749* / KHDRBS1* / KH RNA binding domain containing, signal transduction associated 1* / KH dom...ENSDARG0000007047529
sf1 / splicing factor 1 / Q15637* / Q64213*ENSDARG0000000818827


Protein motifs (from Interpro)
Interpro ID Name
 IPR004087  K Homology domain
 IPR004088  K Homology domain, type 1
 IPR032367  Protein quaking, putative nuclear localisation signal
 IPR032377  STAR protein, homodimerisation region


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0006417 regulation of translation IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0051028 mRNA transport IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0017124 SH3 domain binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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