ENSDARG00000018788


Danio rerio

Features
Gene ID: ENSDARG00000018788
  
Biological name :st8sia2
  
Synonyms : ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 / st8sia2
  
Possible biological names infered from orthology : Alpha-2,8-sialyltransferase 8B / O35696 / Q92186
  
Species: Danio rerio
  
Chr. number: 18
Strand: -1
Band:
Gene start: 25027495
Gene end: 25051846
  
Corresponding Affymetrix probe sets: Dr.465.1.S1_at (Zebrafish Array)   NM_153662_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000022709
NCBI entrez gene - 555134     See in Manteia.
RefSeq - NM_153662
RefSeq Peptide - NP_705948
swissprot - Q1LVN2
ZFIN ID - ZDB-GENE-020919-4
Ensembl - ENSDARG00000018788
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ST8SIA2ENSGALG00000006882Gallus gallus
 Q92186ENSG00000140557Homo sapiens
 O35696ENSMUSG00000025789Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
st8sia4 / ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 / Q92187*ENSDARG0000010360049
st8sia3 / ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 / O43173* / Q64689* / Sia-alpha-2,3-Gal-beta-1,4-GlcNAc-R:alpha 2,8-sialyltransferase *ENSDARG0000004530130
st8sia7.1 / ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 7.1ENSDARG0000005421129
st8sia5 / ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 / O15466* / P70126* / Alpha-2,8-sialyltransferase 8E *ENSDARG0000003658428
st8sia6 / ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6ENSDARG0000002119527
st8sia1 / ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 / Q64687* / Q92185* / Alpha-N-acetylneuraminide alpha-2,8-sialyltransferase *ENSDARG0000009822127


Protein motifs (from Interpro)
Interpro ID Name
 IPR001675  Glycosyl transferase family 29
 IPR012163  Sialyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006486 protein glycosylation IEA
 biological_processGO:0097503 sialylation IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0008373 sialyltransferase activity ISS
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA


Pathways (from Reactome)
Pathway description
Sialic acid metabolism
NCAM1 interactions
N-Glycan antennae elongation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000320 caudal commissure caudal commissure defasciculated , abnormal
Show

 ZFA:0000338 diencephalic white matter diencephalic white matter split , abnormal
diencephalic white matter decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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