ENSMUSG00000025789


Mus musculus

Features
Gene ID: ENSMUSG00000025789
  
Biological name :St8sia2
  
Synonyms : Alpha-2,8-sialyltransferase 8B / O35696 / St8sia2
  
Possible biological names infered from orthology : Q92186 / ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2
  
Species: Mus musculus
  
Chr. number: 7
Strand: -1
Band: D1
Gene start: 73939119
Gene end: 74013690
  
Corresponding Affymetrix probe sets: 10564624 (MoGene1.0st)   1420377_at (Mouse Genome 430 2.0 Array)   1449843_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000141307
Ensembl peptide - ENSMUSP00000026896
NCBI entrez gene - 20450     See in Manteia.
MGI - MGI:106020
RefSeq - NM_009181
RefSeq - XM_006540731
RefSeq Peptide - NP_033207
swissprot - A0A0A6YVX5
swissprot - O35696
Ensembl - ENSMUSG00000025789
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 st8sia2ENSDARG00000018788Danio rerio
 ST8SIA2ENSGALG00000006882Gallus gallus
 Q92186ENSG00000140557Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q64692 / St8sia4 / ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 / Q92187*ENSMUSG0000004071056
Q64689 / St8sia3 / Sia-alpha-2,3-Gal-beta-1,4-GlcNAc-R:alpha 2,8-sialyltransferase / O43173* / ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3*ENSMUSG0000005681233
Q64687 / St8sia1 / Alpha-N-acetylneuraminide alpha-2,8-sialyltransferase / Q92185* / ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1*ENSMUSG0000003028328
P70126 / St8sia5 / Alpha-2,8-sialyltransferase 8E / O15466* / ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5*ENSMUSG0000002542526
Q8K4T1 / St8sia6 / ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 / P61647*ENSMUSG0000000341825


Protein motifs (from Interpro)
Interpro ID Name
 IPR001675  Glycosyl transferase family 29
 IPR012163  Sialyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001574 ganglioside biosynthetic process IEA
 biological_processGO:0006486 protein glycosylation IEA
 biological_processGO:0006491 N-glycan processing IEA
 biological_processGO:0009311 oligosaccharide metabolic process IEA
 biological_processGO:0097503 sialylation IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005769 early endosome IDA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0055037 recycling endosome IDA
 molecular_functionGO:0003828 alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008373 sialyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA


Pathways (from Reactome)
Pathway description
Sialic acid metabolism
NCAM1 interactions
N-Glycan antennae elongation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000780 abnormal corpus callosum morphology "malformation or absence of a thick bundle of nerve fibers comprising a commissural plate connecting the two cerebral hemispheres; it consists of contralateral axon projections that provides communications between the right and left cerebral hemispheres" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Kiss1rtm1Rla/Kiss1rtm1Rla
Genetic Background: involves: 129S1/SvImJ

 MP:0000788 abnormal cerebral cortex morphology "malformed gray cellular mantle covering the surface of the brain" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, J:38857]
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Allelic Composition: Kiss1rtm1Rla/Kiss1rtm1Rla
Genetic Background: involves: 129S1/SvImJ

 MP:0000807 abnormal hippocampus morphology "absent or malformed deep lying structure of the cerebrum involved with memory storage and spatial navigation" [The Atlas of Mouse Development:ISBN 0-12-402035-6, MGI:Cls, J:38857]
Show

Allelic Composition: Cux1tm1Mbu/Cux1tm1Mbu
Genetic Background: involves: OF1

 MP:0000823 abnormal lateral ventricle morphology "malformation or absence of cavity in each of the cerebral hemispheres derived from the cavity of the embryonic neural tube; they are separated from each other by the septum pellucidum, and each communicates with the third ventricle by the foramen of Monro, through which also the choroid plexuses of the lateral ventricles become continuous with that of the third ventricle" [MeSH:National Library of Medicine - Medical Subject Headings , 2003, cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Kiss1rtm1Rla/Kiss1rtm1Rla
Genetic Background: involves: 129S1/SvImJ

 MP:0000825 dilated lateral ventricles "increase over the normal size of the horseshoe-shaped cavities of the cerebrum" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, MGI:CLS, J:38857]
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Allelic Composition: Kiss1rtm1Rla/Kiss1rtm1Rla
Genetic Background: involves: 129S1/SvImJ

 MP:0000830 abnormal diencephalon morphology "any malformation or absence of the paired caudal parts of the prosencephalon from which the thalamus, hypothalamus, epithalamus and subthalamus are derived; these regions regulate autonomic, visceral and endocrine function, and process information directed to the cerebral cortex" [MeSH:National Library of Medicine - Medical Subject Headings , 2003, Principles of Neural Science , 3rd edition:ISBN 0-8385-8034-3]
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Allelic Composition: Kiss1rtm1Rla/Kiss1rtm1Rla
Genetic Background: involves: 129S1/SvImJ

 MP:0000852 small cerebellum "reduced size of cerebellum" [MGI:CLS, J:17203, J:67524]
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Allelic Composition: Kiss1rtm1Rla/Kiss1rtm1Rla
Genetic Background: involves: 129S1/SvImJ

 MP:0000952 abnormal CNS glia "anomalous structure, number or composition of non-neuronal cells of the central nervous system that form the myelin insulation of nervous pathways, guide neuronal migration during development, and exchange metabolites with neurons" [MeSH:National Library of Medicine - Medical Subject Headings , 2003]
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Allelic Composition: Kiss1rtm1Rla/Kiss1rtm1Rla
Genetic Background: involves: 129S1/SvImJ

 MP:0001265 reduced body size "smaller than average body weight, height and/or length of an organism compared to controls" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, J:23170]
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Allelic Composition: Kiss1rtm1Rla/Kiss1rtm1Rla
Genetic Background: involves: 129S1/SvImJ

 MP:0001415 increased exploration in new environment "greater amount of time spent investigating new location" [J:28825]
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Allelic Composition: Cux1tm1Mbu/Cux1tm1Mbu
Genetic Background: involves: OF1

 MP:0001454 abnormal cued conditioning behavior "defect in the ability of an animal to learn and remember an association between an an aversive experience (the unconditioned stimulus (US), ususally a shock) and a neutral stimulus (the conditioned stimulus (CS), usually an auditory cue or light)" [CFG:Center for Functional Genomics , Northwestern University]
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Allelic Composition: Cux1tm1Mbu/Cux1tm1Mbu
Genetic Background: involves: OF1

 MP:0001469 abnormal contextual conditioning "defect in the ability of an animal to learn and remember an association between an an aversive experience (the unconditioned stimulus (US), ususally a shock) and a neutral stimulus (the conditioned stimulus (CS), or the environmental context in this case)" [CFG:Center for Functional Genomics , Northwestern University]
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Allelic Composition: Cux1tm1Mbu/Cux1tm1Mbu
Genetic Background: involves: OF1

 MP:0002066 abnormal motor capabilities/coordination/movement "altered ability to coordinate voluntary movement or repetitive, compulsive movements" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Kiss1rtm1Rla/Kiss1rtm1Rla
Genetic Background: involves: 129S1/SvImJ

 MP:0002152 abnormal brain morphology "anomalous structure of or abnormal development of the brain, one of the two components of the central nervous system and the center of thought and emotion; controls coordination, bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.)" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator, http://cancerweb.ncl.ac.uk]
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Allelic Composition: Kiss1rtm1Rla/Kiss1rtm1Rla
Genetic Background: involves: 129S1/SvImJ

 MP:0002182 abnormal astrocyte morphology "anomalous structure, number or compostion of one of the large neuroglia cells of nervous tissue" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Kiss1rtm1Rla/Kiss1rtm1Rla
Genetic Background: involves: 129S1/SvImJ

 MP:0002741 small olfactory bulb "reduced size of the forebrain region that coordinates neuronal signaling involved in the perception of smell; it receives input from the sensory neurons and outputs to the olfactory cortex" [J:79871]
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Allelic Composition: Kiss1rtm1Rla/Kiss1rtm1Rla
Genetic Background: involves: 129S1/SvImJ

 MP:0002761 abnormal hippocampal mossy fiber morphology "absence or misprojection of axons of neuronal cells in the dentate gyrus" [MeSH:National Library of Medicine - Medical Subject Headings , 2003, J:4978]
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Allelic Composition: Cux1tm1Mbu/Cux1tm1Mbu
Genetic Background: involves: OF1

 MP:0002799 abnormal passive avoidance behavior "defects in the ability of an animal to enter an hostile environment where it receives a unpleasant or punishing stimuli applied previously with prolonged latency" [CFG:Center for Functional Genomics , Northwestern University]
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Allelic Composition: Cux1tm1Mbu/Cux1tm1Mbu
Genetic Background: involves: OF1

 MP:0003203 increased neuron apoptosis "increase in the number of neurons undergoing programmed cell death" [RGD:Rat Genome Database submission]
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Allelic Composition: Kiss1rtm1Rla/Kiss1rtm1Rla
Genetic Background: involves: 129S1/SvImJ

 MP:0003240 loss of hippocampal neurons "loss of neurons in the hippocampal region of the brain, commonly due to an apoptotic event" [RGD:Rat Genome Database submission]
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Allelic Composition: Kiss1rtm1Rla/Kiss1rtm1Rla
Genetic Background: involves: 129S1/SvImJ

 MP:0004101 abnormal brain interneuron morphology "malformation or absence of neurons that exclusively interact with other neurons in the brain; this includes most brain neuronal cell types" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Kiss1rtm1Rla/Kiss1rtm1Rla
Genetic Background: involves: 129S1/SvImJ

 MP:0004275 abnormal postnatal subventricular zone morphology "any structural anomaly of the mitotically active layer of cells surrounding the brain ventricles in the adult that consists of migrating neuroblasts, astrocytes and transitory amplifying progenitor cells" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator", PMID:12637172]
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Allelic Composition: Kiss1rtm1Rla/Kiss1rtm1Rla
Genetic Background: involves: 129S1/SvImJ

 MP:0004279 abnormal rostral migratory stream morphology "any structural anomaly of the transient structure formed by neurons migrating from the subventricular zone into the olfactory bulbs" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
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Allelic Composition: Kiss1rtm1Rla/Kiss1rtm1Rla
Genetic Background: involves: 129S1/SvImJ

 MP:0006009 abnormal neuronal migration "defective or impaired movement of immature neurons from germinal zones to specific positions where they will reside as they mature" [smb:Susan M Bello, Mouse Genome Informatics Curator]
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Allelic Composition: Kiss1rtm1Rla/Kiss1rtm1Rla
Genetic Background: involves: 129S1/SvImJ

 MP:0006254 thin cerebral cortex "decreased depth of the mantle covering the surface of the cerebral hemispheres" [smb:Susan M Bello, Mouse Genome Informatics Curator, J:84683]
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Allelic Composition: Kiss1rtm1Rla/Kiss1rtm1Rla
Genetic Background: involves: 129S1/SvImJ

 MP:0009937 abnormal neuron differentiation "abnormal growth or development of the cells of the nervous system that receive, conduct, and transmit impulses" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Kiss1rtm1Rla/Kiss1rtm1Rla
Genetic Background: involves: 129S1/SvImJ

 MP:0009969 abnormal cerebral cortex pyramidal cell morphology "any structural anomaly of the projection neurons in the pyramidal cell layer of the cerebral cortex" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition"]
Show

Allelic Composition: Kiss1rtm1Rla/Kiss1rtm1Rla
Genetic Background: involves: 129S1/SvImJ

 MP:0009974 decreased cerebral cortex pyramidal cell number "reduced number of the projection neurons in the pyramidal cell layer of the cerebral cortex" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition"]
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Allelic Composition: Kiss1rtm1Rla/Kiss1rtm1Rla
Genetic Background: involves: 129S1/SvImJ

Allelic Composition: St8sia2tm1Jxm/St8sia2tm1Jxm,St8sia4tm1.1Mifu/St8sia4tm1.1Mifu,Tg(Thy1-YFP)HJrs/?
Genetic Background: involves: C57BL/6 * CBA

 MP:0010012 ectopic cerebral cortex pyramidal cells "the cerebral cortex pyramidal cell body resides in places other than the pyramidal cell layer of the cerebral cortex" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Kiss1rtm1Rla/Kiss1rtm1Rla
Genetic Background: involves: 129S1/SvImJ

 MP:0011085 complete postnatal lethality "premature death anytime between the neonatal period and weaning age of all organisms of a given genotype in a population (Mus: P1 to approximately 3 weeks of age)" [MGI:csmith]
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Allelic Composition: Kiss1rtm1Rla/Kiss1rtm1Rla
Genetic Background: involves: 129S1/SvImJ

 MP:0012468 decreased striatum area "reduced size of a large cluster of dopaminergic nerve cells, consisting of the caudate nucleus and the putamen, that controls movement, balance, and walking" [ISBN:0838580343, MGI:csmith]
Show

Allelic Composition: Kiss1rtm1Rla/Kiss1rtm1Rla
Genetic Background: involves: 129S1/SvImJ

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
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