ENSDARG00000027523


Danio rerio
channeltrpc7aiontransientreceptortransportpotentialdomainankyrincanonicaltransmembranecalciummembraneactivityrepeatrepeat-containingintegralcomponenteffectspiphydrolysiselevationcytosoliccalevelstrpchannels

Features
Gene ID: ENSDARG00000027523
  
Biological name :trpc7a
  
Synonyms : transient receptor potential cation channel, subfamily C, member 7a / trpc7a
  
Possible biological names infered from orthology : Q9HCX4 / Q9WVC5 / transient receptor potential cation channel subfamily C member 7 / TRPC7
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 21395298
Gene end: 21428998
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000113233
NCBI entrez gene - 567566     See in Manteia.
RefSeq - NM_001289879
RefSeq Peptide - NP_001276808
swissprot - E9QGJ3
ZFIN ID - ZDB-GENE-091113-40
Ensembl - ENSDARG00000027523
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRPC7ENSGALG00000006297Gallus gallus
 TRPC7ENSG00000069018Homo sapiens
 Trpc7ENSMUSG00000021541Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
trpc7b / transient receptor potential cation channel, subfamily C, member 7b / TRPC7* / Q9HCX4* / transient receptor potential cation channel subfamily C member 7*ENSDARG0000007946973
trpc3 / transient receptor potential cation channel, subfamily C, member 3 / Q13507*ENSDARG0000009829170
trpc6a / transient receptor potential cation channel, subfamily C, member 6a / TRPC6* / Q61143* / Q9Y210* / transient receptor potential cation channel subfamily C member 6*ENSDARG0000005662568
trpc6b / transient receptor potential cation channel, subfamily C, member 6b / TRPC6* / Q61143* / Q9Y210* / transient receptor potential cation channel subfamily C member 6*ENSDARG0000006773068
trpc4b / transient receptor potential cation channel, subfamily C, member 4b / TRPC4* / Q9QUQ5* / Q9UBN4* / transient receptor potential cation channel subfamily C member 4*ENSDARG0000010201737
trpc4a / transient receptor potential cation channel, subfamily C, member 4a / TRPC4* / Q9QUQ5* / Q9UBN4* / transient receptor potential cation channel subfamily C member 4*ENSDARG0000007050736
trpc5b / transient receptor potential cation channel, subfamily C, member 5b / TRPC5* / Q9QX29* / Q9UL62* / transient receptor potential cation channel subfamily C member 5*ENSDARG0000006083735
trpc2b / transient receptor potential cation channel, subfamily C, member 2b / Trpc2* / Q9R244* / Xntrpc* / Short transient receptor potential channel 2 * / Xndc1-transient receptor potenti...ENSDARG0000000334432
trpc2a / transient receptor potential cation channel, subfamily C, member 2a / Trpc2* / Q9R244* / Xntrpc* / Short transient receptor potential channel 2 * / Xndc1-transient receptor potenti...ENSDARG0000003906532
trpc1 / transient receptor potential cation channel, subfamily C, member 1 / P48995*ENSDARG0000006120331
trpc5a / transient receptor potential cation channel, subfamily C, member 5a / TRPC5* / Q9QX29* / Q9UL62* / transient receptor potential cation channel subfamily C member 5*ENSDARG0000007050426


Protein motifs (from Interpro)
Interpro ID Name
 IPR002110  Ankyrin repeat
 IPR002153  Transient receptor potential channel, canonical
 IPR004729  Transient receptor potential channel
 IPR005463  Transient receptor potential channel, canonical 7
 IPR005821  Ion transport domain
 IPR013555  Transient receptor ion channel domain
 IPR020683  Ankyrin repeat-containing domain


Gene Ontology (GO)
establishment of localizationestablishment of localizationestablishment of localizationestablishment of localizationestablishment of localizationestablishment of localizationestablishment of localizationestablishment of localizationestablishment of localizationestablishment of localizationestablishment of localizationestablishment of localization
transmembrane transporter activitytransmembrane transporter activitytransmembrane transporter activitytransmembrane transporter activitytransmembrane transporter activitytransmembrane transporter activitytransmembrane transporter activitytransmembrane transporter activitytransmembrane transporter activitytransmembrane transporter activitytransmembrane transporter activitytransmembrane transporter activity
membranemembranemembranemembranemembranemembranemembranemembranemembranemembranemembranemembrane
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0070588 calcium ion transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005216 ion channel activity IEA
 molecular_functionGO:0005262 calcium channel activity IEA


Pathways (from Reactome)
Pathway description
Effects of PIP2 hydrolysis
Elevation of cytosolic Ca2+ levels
TRP channels


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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