ENSGALG00000006297


Gallus gallus

Features
Gene ID: ENSGALG00000006297
  
Biological name :TRPC7
  
Synonyms : transient receptor potential cation channel subfamily C member 7 / TRPC7
  
Possible biological names infered from orthology : Q9HCX4 / Q9WVC5
  
Species: Gallus gallus
  
Chr. number: 13
Strand: 1
Band:
Gene start: 15060539
Gene end: 15118773
  
Corresponding Affymetrix probe sets: GgaAffx.3918.1.S1_s_at (Chicken Array)   GgaAffx.3918.5.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000027731
Ensembl peptide - ENSGALP00000046519
Ensembl peptide - ENSGALP00000045997
NCBI entrez gene - 427641     See in Manteia.
RefSeq - XM_004944983
RefSeq - XM_015293981
swissprot - A0A1D5P1I1
swissprot - A0A1D5P025
swissprot - F1NYQ1
Ensembl - ENSGALG00000006297
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trpc7aENSDARG00000027523Danio rerio
 trpc7bENSDARG00000079469Danio rerio
 TRPC7ENSG00000069018Homo sapiens
 Trpc7ENSMUSG00000021541Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TRPC3 / transient receptor potential cation channel subfamily C member 3 / Q13507*ENSGALG0000001187580
TRPC6 / transient receptor potential cation channel subfamily C member 6 / Q61143* / Q9Y210*ENSGALG0000002941675
TRPC5 / transient receptor potential cation channel subfamily C member 5 / Q9QX29* / Q9UL62*ENSGALG0000000797237
TRPC4 / transient receptor potential cation channel subfamily C member 4 / Q9QUQ5* / Q9UBN4*ENSGALG0000001704437
TRPC1 / transient receptor potential cation channel subfamily C member 1 / P48995*ENSGALG0000000263932


Protein motifs (from Interpro)
Interpro ID Name
 IPR002110  Ankyrin repeat
 IPR002153  Transient receptor potential channel, canonical
 IPR004729  Transient receptor potential channel
 IPR005463  Transient receptor potential channel, canonical 7
 IPR005821  Ion transport domain
 IPR013555  Transient receptor ion channel domain
 IPR016024  Armadillo-type fold
 IPR020683  Ankyrin repeat-containing domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006816 calcium ion transport IEA
 biological_processGO:0006828 manganese ion transport IEA
 biological_processGO:0007338 single fertilization IBA
 biological_processGO:0051480 regulation of cytosolic calcium ion concentration IBA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0070588 calcium ion transmembrane transport IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005216 ion channel activity IEA
 molecular_functionGO:0005262 calcium channel activity IEA
 molecular_functionGO:0015279 store-operated calcium channel activity IBA


Pathways (from Reactome)
Pathway description
Effects of PIP2 hydrolysis
Elevation of cytosolic Ca2+ levels
TRP channels


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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