ENSGALG00000007972


Gallus gallus

Features
Gene ID: ENSGALG00000007972
  
Biological name :TRPC5
  
Synonyms : transient receptor potential cation channel subfamily C member 5 / TRPC5
  
Possible biological names infered from orthology : Q9QX29 / Q9UL62
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 13131065
Gene end: 13192353
  
Corresponding Affymetrix probe sets: GgaAffx.4993.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000012929
NCBI entrez gene - 422337     See in Manteia.
RefSeq - XM_420310
swissprot - E1C452
Ensembl - ENSGALG00000007972
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trpc5aENSDARG00000070504Danio rerio
 trpc5bENSDARG00000060837Danio rerio
 TRPC5ENSG00000072315Homo sapiens
 Trpc5ENSMUSG00000041710Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TRPC4 / transient receptor potential cation channel subfamily C member 4 / Q9QUQ5* / Q9UBN4*ENSGALG0000001704468
TRPC1 / transient receptor potential cation channel subfamily C member 1 / P48995*ENSGALG0000000263936
TRPC7 / transient receptor potential cation channel subfamily C member 7 / Q9HCX4* / Q9WVC5*ENSGALG0000000629733
TRPC3 / transient receptor potential cation channel subfamily C member 3 / Q13507*ENSGALG0000001187533
TRPC6 / transient receptor potential cation channel subfamily C member 6 / Q61143* / Q9Y210*ENSGALG0000002941633


Protein motifs (from Interpro)
Interpro ID Name
 IPR002110  Ankyrin repeat
 IPR002153  Transient receptor potential channel, canonical
 IPR004729  Transient receptor potential channel
 IPR005461  Transient receptor potential channel, canonical 5
 IPR005821  Ion transport domain
 IPR013555  Transient receptor ion channel domain
 IPR020683  Ankyrin repeat-containing domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006828 manganese ion transport IBA
 biological_processGO:0051480 regulation of cytosolic calcium ion concentration IBA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0070588 calcium ion transmembrane transport IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0034704 calcium channel complex IEA
 molecular_functionGO:0005216 ion channel activity IEA
 molecular_functionGO:0005262 calcium channel activity IEA
 molecular_functionGO:0015279 store-operated calcium channel activity IBA
 molecular_functionGO:0070679 inositol 1,4,5 trisphosphate binding IEA


Pathways (from Reactome)
Pathway description
TRP channels


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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