ENSDARG00000029621


Danio rerio
membranesgms1integralcomponentdomainsphingomyelinsterilealphamotifbiosyntheticprocessceramideactivitypointedsuperfamilysynthase-likeplasmagolgiendoplasmicreticulumsynthasecholinephosphotransferase

Features
Gene ID: ENSDARG00000029621
  
Biological name :sgms1
  
Synonyms : sgms1 / sphingomyelin synthase 1
  
Possible biological names infered from orthology : Phosphatidylcholine:ceramide cholinephosphotransferase 1 / Q8VCQ6
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 6065661
Gene end: 6114296
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000117358
Ensembl peptide - ENSDARP00000135828
Ensembl peptide - ENSDARP00000117698
NCBI entrez gene - 566563     See in Manteia.
RefSeq - NM_001077614
RefSeq Peptide - NP_001071082
swissprot - E9QDV6
swissprot - A0JMN0
ZFIN ID - ZDB-GENE-061103-295
Ensembl - ENSDARG00000029621
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SGMS1ENSGALG00000003701Gallus gallus
 SGMS1ENSG00000198964Homo sapiens
 Sgms1ENSMUSG00000040451Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:91976 / SGMS1* / Q8VCQ6* / sphingomyelin synthase 1* / Phosphatidylcholine:ceramide cholinephosphotransferase 1 *ENSDARG0000005705366
sgms2 / sphingomyelin synthase 2ENSDARG0000005252046
zgc:100911ENSDARG0000003689740
SAMD8 / zgc:162183 / Q96LT4* / Q9DA37* / sterile alpha motif domain containing 8*ENSDARG0000007466334


Protein motifs (from Interpro)
Interpro ID Name
 IPR001660  Sterile alpha motif domain
 IPR013761  Sterile alpha motif/pointed domain superfamily
 IPR025749  Sphingomyelin synthase-like domain


Gene Ontology (GO)
nitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic nitrogen compound metabolic processbiosynthetic processbiosynthetic processcellular metabolic processcellular metabolic processprimary metabolic processprimary metabolic processorganic substance metabolic organic substance metabolic process
transferase activitytransferase activitytransferase activitytransferase activitytransferase activitytransferase activitytransferase activitytransferase activitytransferase activitytransferase activitytransferase activitytransferase activity
cellmembraneorganellecellmembraneorganellecellmembraneorganellecellmembraneorganellecellmembraneorganellecellmembraneorganellecellmembraneorganellecellmembraneorganellecellmembraneorganellecellmembraneorganellecellcellmembranemembraneorganelleorganelle
TypeGO IDTermEv.Code
 biological_processGO:0006686 sphingomyelin biosynthetic process IBA
 biological_processGO:0046513 ceramide biosynthetic process IBA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030173 integral component of Golgi membrane IBA
 cellular_componentGO:0030176 integral component of endoplasmic reticulum membrane IBA
 molecular_functionGO:0033188 sphingomyelin synthase activity IBA
 molecular_functionGO:0047493 ceramide cholinephosphotransferase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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