ENSDARG00000036897


Danio rerio

Features
Gene ID: ENSDARG00000036897
  
Biological name :zgc:100911
  
Synonyms : zgc:100911
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 45304830
Gene end: 45398655
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000125103
Ensembl peptide - ENSDARP00000053570
NCBI entrez gene - 445247     See in Manteia.
RefSeq - NM_001003641
RefSeq Peptide - NP_001003641
swissprot - F8W5G6
swissprot - F1QGE8
swissprot - Q6DEI3
ZFIN ID - ZDB-GENE-040801-162
Ensembl - ENSDARG00000036897
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sgms2 / sphingomyelin synthase 2ENSDARG0000005252054
zgc:91976 / SGMS1* / Q8VCQ6* / sphingomyelin synthase 1* / Phosphatidylcholine:ceramide cholinephosphotransferase 1 *ENSDARG0000005705345
sgms1 / sphingomyelin synthase 1 / Q8VCQ6* / Phosphatidylcholine:ceramide cholinephosphotransferase 1 *ENSDARG0000002962144
SAMD8 / zgc:162183 / Q96LT4* / Q9DA37* / sterile alpha motif domain containing 8*ENSDARG0000007466332


Protein motifs (from Interpro)
Interpro ID Name
 IPR025749  Sphingomyelin synthase-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006686 sphingomyelin biosynthetic process IBA
 biological_processGO:0046513 ceramide biosynthetic process IBA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030173 integral component of Golgi membrane IBA
 cellular_componentGO:0030176 integral component of endoplasmic reticulum membrane IBA
 molecular_functionGO:0033188 sphingomyelin synthase activity IBA
 molecular_functionGO:0047493 ceramide cholinephosphotransferase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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