ENSDARG00000038668


Danio rerio

Features
Gene ID: ENSDARG00000038668
  
Biological name :gbp1
  
Synonyms : gbp1 / guanylate binding protein 1
  
Possible biological names infered from orthology : Gbp10 / Gbp11 / GBP2 / Gbp2b / GBP3 / GBP4 / GBP5 / GBP6 / GBP7 / Gbp8 / Gbp9 / Gm43302 / guanylate binding protein 2 / guanylate binding protein 3 / guanylate binding protein 4 / guanylate binding protein 5 / guanylate binding protein 7 / guanylate binding protein family member 6 / Mus musculus guanylate binding protein 11 (Gbp11), transcript variant 1, mRNA. / Mus musculus guanylate binding protein 3 (Gbp3), transcript variant 4, mRNA. / Mus musculus guanylate binding protein 4 (Gbp4), transcript variant 6, mRNA. / P32455 / P32456 / Q61107 / Q6ZN66 / Q8CFB4 / Q8N8V2 / Q96PP8 / Q96PP9 / Q9H0R5 / Q9Z0E6
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 42020915
Gene end: 42035307
  
Corresponding Affymetrix probe sets: Dr.14275.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000056459
Ensembl peptide - ENSDARP00000114155
NCBI entrez gene - 436615     See in Manteia.
RefSeq - XM_005171375
RefSeq - XM_021479745
RefSeq - NM_001002343
RefSeq Peptide - NP_001002343
swissprot - Q6DHP7
swissprot - E9QBY9
ZFIN ID - ZDB-GENE-040718-32
Ensembl - ENSDARG00000038668
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000000720Gallus gallus
 GBPENSGALG00000026152Gallus gallus
 GBP1ENSG00000117228Homo sapiens
 GBP2ENSG00000162645Homo sapiens
 GBP3ENSG00000117226Homo sapiens
 GBP4ENSG00000162654Homo sapiens
 GBP5ENSG00000154451Homo sapiens
 GBP6ENSG00000183347Homo sapiens
 GBP7ENSG00000213512Homo sapiens
 Gbp10ENSMUSG00000105096Mus musculus
 Gbp11ENSMUSG00000092021Mus musculus
 Gbp2ENSMUSG00000028270Mus musculus
 Gbp2bENSMUSG00000040264Mus musculus
 Gbp3ENSMUSG00000028268Mus musculus
 Gbp4ENSMUSG00000079363Mus musculus
 Gbp5ENSMUSG00000105504Mus musculus
 Gbp6ENSMUSG00000104713Mus musculus
 Gbp7ENSMUSG00000040253Mus musculus
 Gbp8ENSMUSG00000034438Mus musculus
 Gbp9ENSMUSG00000029298Mus musculus
 Gm43302ENSMUSG00000079362Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-209n20.1 / Gbp8* / Gbp9* / GBP1* / GBP2* / GBP3* / GBP4* / GBP5* / GBP6* / GBP7* / Gbp10* / Gbp11* / Gbp2b* / P32455* / Q9Z0E6* / Q9H0R5* / Q96PP9* / Q96PP8* / Q8N8V2* / Q8CFB4* / ...ENSDARG0000009938252
gbp2 / guanylate binding protein 2 / GBP1* / GBP7* / Gbp8* / Gbp9* / GBP3* / GBP4* / GBP5* / GBP6* / Gbp10* / Gbp2b* / Gbp11* / Q9Z0E6* / P32455* / P32456* / Q61107* / Q6ZN66* / Q8CFB4* / Q...ENSDARG0000003866944
gbp4 / guanylate binding protein 4 / GBP1* / GBP2* / GBP7* / Gbp8* / Gbp9* / GBP3* / GBP5* / GBP6* / Gbp2b* / Gbp11* / Gbp10* / Q9Z0E6* / P32455* / P32456* / Q61107* / Q6ZN66* / Q8CFB4* / Q...ENSDARG0000006885741
si:dkeyp-30d6.2 / Gbp8* / Gbp9* / GBP1* / GBP2* / GBP3* / GBP4* / GBP5* / GBP6* / GBP7* / Gbp10* / Gbp11* / Gbp2b* / P32455* / Q9Z0E6* / Q9H0R5* / Q96PP9* / Q96PP8* / Q8N8V2* / Q8CFB4* / Q6...ENSDARG0000010356438
unm_sa911 / un-named sa911 / GBP3* / GBP4* / GBP5* / GBP6* / GBP7* / GBP2* / GBP1* / Q6ZN66* / Q8N8V2* / Q96PP8* / Q96PP9* / Q9H0R5* / P32455* / P32456* / guanylate binding protein 2* / gua...ENSDARG0000003406329
zmp:0000000527 / GBP2* / GBP3* / GBP4* / GBP5* / GBP6* / GBP7* / GBP1* / P32456* / Q6ZN66* / Q8N8V2* / Q96PP8* / Q96PP9* / Q9H0R5* / P32455* / guanylate binding protein 1* / guanylate bindi...ENSDARG0000000562717
CABZ01068208.1 / GBP2* / GBP3* / GBP4* / GBP5* / GBP6* / GBP7* / GBP1* / Q9H0R5* / P32455* / P32456* / Q6ZN66* / Q8N8V2* / Q96PP8* / Q96PP9* / guanylate binding protein 1* / guanylate bindi...ENSDARG0000011267517
CABZ01068209.1 / GBP2* / GBP3* / GBP4* / GBP5* / GBP6* / GBP7* / GBP1* / Q9H0R5* / P32455* / P32456* / Q6ZN66* / Q8N8V2* / Q96PP8* / Q96PP9* / guanylate binding protein 1* / guanylate bindi...ENSDARG000001106167


Protein motifs (from Interpro)
Interpro ID Name
 IPR003191  Guanylate-binding protein/Atlastin, C-terminal
 IPR015894  Guanylate-binding protein, N-terminal
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR030386  GB1/RHD3-type guanine nucleotide-binding (G) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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