ENSDARG00000103564


Danio rerio

Features
Gene ID: ENSDARG00000103564
  
Biological name :si:dkeyp-30d6.2
  
Synonyms : si:dkeyp-30d6.2
  
Possible biological names infered from orthology : GBP1 / Gbp10 / Gbp11 / GBP2 / Gbp2b / GBP3 / GBP4 / GBP5 / GBP6 / GBP7 / Gbp8 / Gbp9 / Gm43302 / guanylate binding protein 1 / guanylate binding protein 2 / guanylate binding protein 3 / guanylate binding protein 4 / guanylate binding protein 5 / guanylate binding protein 7 / guanylate binding protein family member 6 / Mus musculus guanylate binding protein 11 (Gbp11), transcript variant 1, mRNA. / Mus musculus guanylate binding protein 3 (Gbp3), transcript variant 4, mRNA. / Mus musculus guanylate binding protein 4 (Gbp4), transcript variant 6, mRNA. / P32455 / P32456 / Q61107 / Q6ZN66 / Q8CFB4 / Q8N8V2 / Q96PP8 / Q96PP9 / Q9H0R5 / Q9Z0E6
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 8825382
Gene end: 8836722
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000137004
Ensembl peptide - ENSDARP00000139111
Ensembl peptide - ENSDARP00000139426
swissprot - A0A0R4IRX6
swissprot - A0A0R4ITT0
swissprot - A0A0R4IWC7
ZFIN ID - ZDB-GENE-141222-83
Ensembl - ENSDARG00000103564
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000000720Gallus gallus
 GBPENSGALG00000026152Gallus gallus
 GBP1ENSG00000117228Homo sapiens
 GBP2ENSG00000162645Homo sapiens
 GBP3ENSG00000117226Homo sapiens
 GBP4ENSG00000162654Homo sapiens
 GBP5ENSG00000154451Homo sapiens
 GBP6ENSG00000183347Homo sapiens
 GBP7ENSG00000213512Homo sapiens
 Gbp10ENSMUSG00000105096Mus musculus
 Gbp11ENSMUSG00000092021Mus musculus
 Gbp2ENSMUSG00000028270Mus musculus
 Gbp2bENSMUSG00000040264Mus musculus
 Gbp3ENSMUSG00000028268Mus musculus
 Gbp4ENSMUSG00000079363Mus musculus
 Gbp5ENSMUSG00000105504Mus musculus
 Gbp6ENSMUSG00000104713Mus musculus
 Gbp7ENSMUSG00000040253Mus musculus
 Gbp8ENSMUSG00000034438Mus musculus
 Gbp9ENSMUSG00000029298Mus musculus
 Gm43302ENSMUSG00000079362Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-209n20.1 / Gbp8* / Gbp9* / GBP1* / GBP2* / GBP3* / GBP4* / GBP5* / GBP6* / GBP7* / Gbp10* / Gbp11* / Gbp2b* / P32455* / Q9Z0E6* / Q9H0R5* / Q96PP9* / Q96PP8* / Q8N8V2* / Q8CFB4* / ...ENSDARG0000009938299
gbp4 / guanylate binding protein 4 / GBP1* / GBP2* / GBP7* / Gbp8* / Gbp9* / GBP3* / GBP5* / GBP6* / Gbp2b* / Gbp11* / Gbp10* / Q9Z0E6* / P32455* / P32456* / Q61107* / Q6ZN66* / Q8CFB4* / Q...ENSDARG0000006885784
gbp1 / guanylate binding protein 1 / Gbp8* / Gbp9* / GBP2* / GBP3* / GBP4* / GBP5* / GBP6* / GBP7* / Gbp10* / Gbp2b* / Gbp11* / Q9Z0E6* / P32455* / P32456* / Q61107* / Q6ZN66* / Q8CFB4* / Q...ENSDARG0000003866862
gbp2 / guanylate binding protein 2 / GBP1* / GBP7* / Gbp8* / Gbp9* / GBP3* / GBP4* / GBP5* / GBP6* / Gbp10* / Gbp2b* / Gbp11* / Q9Z0E6* / P32455* / P32456* / Q61107* / Q6ZN66* / Q8CFB4* / Q...ENSDARG0000003866956
unm_sa911 / un-named sa911 / GBP3* / GBP4* / GBP5* / GBP6* / GBP7* / GBP2* / GBP1* / Q6ZN66* / Q8N8V2* / Q96PP8* / Q96PP9* / Q9H0R5* / P32455* / P32456* / guanylate binding protein 2* / gua...ENSDARG0000003406337
zmp:0000000527 / GBP2* / GBP3* / GBP4* / GBP5* / GBP6* / GBP7* / GBP1* / P32456* / Q6ZN66* / Q8N8V2* / Q96PP8* / Q96PP9* / Q9H0R5* / P32455* / guanylate binding protein 1* / guanylate bindi...ENSDARG0000000562734
CABZ01068208.1 / GBP2* / GBP3* / GBP4* / GBP5* / GBP6* / GBP7* / GBP1* / Q9H0R5* / P32455* / P32456* / Q6ZN66* / Q8N8V2* / Q96PP8* / Q96PP9* / guanylate binding protein 1* / guanylate bindi...ENSDARG0000011267534
CABZ01068209.1 / GBP2* / GBP3* / GBP4* / GBP5* / GBP6* / GBP7* / GBP1* / Q9H0R5* / P32455* / P32456* / Q6ZN66* / Q8N8V2* / Q96PP8* / Q96PP9* / guanylate binding protein 1* / guanylate bindi...ENSDARG0000011061616


Protein motifs (from Interpro)
Interpro ID Name
 IPR003191  Guanylate-binding protein/Atlastin, C-terminal
 IPR015894  Guanylate-binding protein, N-terminal
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR030386  GB1/RHD3-type guanine nucleotide-binding (G) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr