ENSDARG00000043238


Danio rerio

Features
Gene ID: ENSDARG00000043238
  
Biological name :atg16l2
  
Synonyms : ATG16 autophagy related 16-like 2 (S. cerevisiae) / atg16l2
  
Possible biological names infered from orthology : autophagy related 16 like 2 / autophagy related 16-like 2 (S. cerevisiae) / Q6KAU8 / Q8NAA4
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 5542068
Gene end: 5563551
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000090294
swissprot - F1RAF4
ZFIN ID - ZDB-GENE-060503-197
Ensembl - ENSDARG00000043238
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q8NAA4ENSG00000168010Homo sapiens
 Q6KAU8ENSMUSG00000047767Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
atg16l1 / ATG16 autophagy related 16-like 1 (S. cerevisiae) / Q8C0J2* / Q676U5* / autophagy related 16 like 1* / autophagy related 16-like 1 (S. cerevisiae)*ENSDARG0000009943027
taf5 / TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor / Q15542* / TATA-box binding protein associated factor 5*ENSDARG000000183259
taf5l / TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor / Q91WQ5* / O75529* / TATA-box binding protein associated factor 5 like* / Mus musculus TATA-box bin...ENSDARG000000258088
atg16l2 / ATG16 autophagy related 16-like 2 (S. cerevisiae) / Q8NAA4* / autophagy related 16 like 2*ENSDARG000001093842
wdr83 / WD repeat domain containing 83 / Q9BRX9* / Q9DAJ4* / WD repeat domain 83*ENSDARG000000416001


Protein motifs (from Interpro)
Interpro ID Name
 IPR013923  Autophagy-related protein 16


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000045 autophagosome assembly IBA
 cellular_componentGO:0000421 autophagosome membrane IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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