ENSDARG00000109384


Danio rerio

Features
Gene ID: ENSDARG00000109384
  
Biological name :atg16l2
  
Synonyms : ATG16 autophagy related 16-like 2 (S. cerevisiae) / atg16l2
  
Possible biological names infered from orthology : autophagy related 16 like 2 / autophagy related 16-like 2 (S. cerevisiae) / Q6KAU8 / Q8NAA4
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 5495003
Gene end: 5524271
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000106749
swissprot - F1QKR3
ZFIN ID - ZDB-GENE-060503-197
Ensembl - ENSDARG00000109384
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q8NAA4ENSG00000168010Homo sapiens
 Q6KAU8ENSMUSG00000047767Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
atg16l1 / ATG16 autophagy related 16-like 1 (S. cerevisiae) / Q8C0J2* / Q676U5* / autophagy related 16 like 1* / autophagy related 16-like 1 (S. cerevisiae)*ENSDARG0000009943045
taf5l / TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor / Q91WQ5* / O75529* / TATA-box binding protein associated factor 5 like* / Mus musculus TATA-box bin...ENSDARG0000002580823
taf5 / TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor / Q15542* / TATA-box binding protein associated factor 5*ENSDARG0000001832519
wdr83 / WD repeat domain containing 83 / Q9BRX9* / Q9DAJ4* / WD repeat domain 83*ENSDARG0000004160018
atg16l2 / ATG16 autophagy related 16-like 2 (S. cerevisiae) / Q8NAA4* / Q6KAU8* / autophagy related 16 like 2* / autophagy related 16-like 2 (S. cerevisiae)*ENSDARG000000432384


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR011042  Six-bladed beta-propeller, TolB-like
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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