ENSDARG00000056200


Danio rerio

Features
Gene ID: ENSDARG00000056200
  
Biological name :abcb9
  
Synonyms : abcb9 / ATP-binding cassette, sub-family B (MDR/TAP), member 9
  
Possible biological names infered from orthology : ATP binding cassette subfamily B member 9 / Q9JJ59 / Q9NP78
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 28018246
Gene end: 28029558
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000073110
NCBI entrez gene - 570148     See in Manteia.
RefSeq - NM_001126434
RefSeq Peptide - NP_001119906
swissprot - A3KGZ4
ZFIN ID - ZDB-GENE-050517-12
Ensembl - ENSDARG00000056200
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ABCB9ENSGALG00000003736Gallus gallus
 ABCB9ENSG00000150967Homo sapiens
 Abcb9ENSMUSG00000029408Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tap2a / transporter associated with antigen processing, subunit type a / TAP2* / Q03519* / P36371* / AL669918.1* / transporter 2, ATP binding cassette subfamily B member* / transporter 2, A...ENSDARG0000003678737
tap1 / transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) / P21958* / Q03518* / transporter 1, ATP binding cassette subfamily B member*ENSDARG0000007976636
tap2t / transporter associated with antigen processing, subunit type t, teleost specific / TAP2* / Q03519* / P36371* / AL669918.1* / transporter 2, ATP binding cassette subfamily B member* ...ENSDARG0000003344633
abcb10 / ATP-binding cassette, sub-family B (MDR/TAP), member 10 / Q9JI39* / Q9NRK6* / ATP binding cassette subfamily B member 10*ENSDARG0000006159129
abcb8 / ATP-binding cassette, sub-family B (MDR/TAP), member 8 / Q9CXJ4* / Q9NUT2* / ATP binding cassette subfamily B member 8*ENSDARG0000005667228


Protein motifs (from Interpro)
Interpro ID Name
 IPR003439  ABC transporter-like
 IPR003593  AAA+ ATPase domain
 IPR011527  ABC transporter type 1, transmembrane domain
 IPR017871  ABC transporter, conserved site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR030254  ATP-binding cassette subfamily B member 9


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015833 peptide transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005765 lysosomal membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0015440 peptide-transporting ATPase activity IEA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA


Pathways (from Reactome)
Pathway description
ABC-family proteins mediated transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000056200 abcb9 / ATP-binding cassette, sub-family B (MDR/TAP), member 9 / Q9JJ59* / Q9NP78* / ATP binding cassette subfamily B member 9*  / complex






 

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