ENSDARG00000033446


Danio rerio

Features
Gene ID: ENSDARG00000033446
  
Biological name :tap2t
  
Synonyms : tap2t / transporter associated with antigen processing, subunit type t, teleost specific
  
Possible biological names infered from orthology : AL669918.1 / P36371 / Q03519 / TAP2 / transporter 2, ATP-binding cassette, sub-family B (MDR/TAP) / transporter 2, ATP binding cassette subfamily B member
  
Species: Danio rerio
  
Chr. number: 12
Strand: -1
Band:
Gene start: 26546820
Gene end: 26559650
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000039509
Ensembl peptide - ENSDARP00000127120
NCBI entrez gene - 556826     See in Manteia.
swissprot - E7F2I0
ZFIN ID - ZDB-GENE-130531-48
Ensembl - ENSDARG00000033446
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TAP2ENSGALG00000029381Gallus gallus
 AL669918.1ENSG00000250264Homo sapiens
 TAP2ENSG00000204267Homo sapiens
 Tap2ENSMUSG00000024339Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tap2a / transporter associated with antigen processing, subunit type a / TAP2* / Q03519* / P36371* / AL669918.1* / transporter 2, ATP binding cassette subfamily B member* / transporter 2, A...ENSDARG0000003678745
abcb9 / ATP-binding cassette, sub-family B (MDR/TAP), member 9 / Q9JJ59* / Q9NP78* / ATP binding cassette subfamily B member 9*ENSDARG0000005620036
tap1 / transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) / P21958* / Q03518* / transporter 1, ATP binding cassette subfamily B member*ENSDARG0000007976634
abcb8 / ATP-binding cassette, sub-family B (MDR/TAP), member 8 / Q9CXJ4* / Q9NUT2* / ATP binding cassette subfamily B member 8*ENSDARG0000005667227
abcb10 / ATP-binding cassette, sub-family B (MDR/TAP), member 10 / Q9JI39* / Q9NRK6* / ATP binding cassette subfamily B member 10*ENSDARG0000006159127


Protein motifs (from Interpro)
Interpro ID Name
 IPR003439  ABC transporter-like
 IPR003593  AAA+ ATPase domain
 IPR011527  ABC transporter type 1, transmembrane domain
 IPR017871  ABC transporter, conserved site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA


Pathways (from Reactome)
Pathway description
ER-Phagosome pathway
Antigen Presentation: Folding, assembly and peptide loading of class I MHC


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000076290 calr / calreticulin / P14211* / P27797*  / reaction
 ENSDARG00000079402 tapbp.1 / TAP binding protein (tapasin), tandem duplicate 1 / TAPBP* / O15533* / TAP binding protein*  / reaction
 ENSDARG00000079766 tap1 / transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) / P21958* / Q03518* / transporter 1, ATP binding cassette subfamily B member*  / complex
 ENSDARG00000100435 Q7SXP0 / sec22bb / SEC22 homolog B, vesicle trafficking protein b / SEC22B* / O08547* / O75396* / Vesicle-trafficking protein SEC22b * / SEC22 homolog B, vesicle trafficking protein (gene/p...  / reaction
 ENSDARG00000045011 tapbp.2 / TAP binding protein (tapasin), tandem duplicate 2 / TAPBP* / O15533* / TAP binding protein*  / reaction






 

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