ENSDARG00000058342


Danio rerio

Features
Gene ID: ENSDARG00000058342
  
Biological name :grhl2a
  
Synonyms : grainyhead-like transcription factor 2a / grhl2a
  
Possible biological names infered from orthology : Grainyhead-like / grainyhead like transcription factor 2 / GRHL2 / Q6ISB3 / Q8K5C0
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 9807263
Gene end: 9830451
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000125051
NCBI entrez gene - 555744     See in Manteia.
swissprot - F8W5L7
ZFIN ID - ZDB-GENE-050913-123
Ensembl - ENSDARG00000058342
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GRHL2ENSGALG00000037687Gallus gallus
 GRHL2ENSG00000083307Homo sapiens
 Grhl2ENSMUSG00000022286Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
grhl2b / grainyhead-like transcription factor 2b / GRHL2* / Q6ISB3* / Q8K5C0* / Grainyhead-like * / grainyhead like transcription factor 2*ENSDARG0000006197464
grhl1 / grainyhead-like transcription factor 1 / Q921D9* / Q9NZI5* / Grainyhead-like *ENSDARG0000006139156
grhl3 / grainyhead-like transcription factor 3 / Q5FWH3* / Q8TE85* / Grainyhead-like *ENSDARG0000007855238
ubp1 / upstream binding protein 1 / Q811S7* / Q9NZI7*ENSDARG0000001800019
tfcp2 / transcription factor CP2 / Q12800* / Q9ERA0* / Mus musculus transcription factor CP2 (Tfcp2), transcript variant 3, mRNA.*ENSDARG0000006030619
tfcp2l1 / transcription factor CP2-like 1 / Q3UNW5* / Q9NZI6* / Transcription factor CP2-like protein 1 *ENSDARG0000002949718


Protein motifs (from Interpro)
Interpro ID Name
 IPR007604  CP2 transcription factor


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 biological_processGO:0007420 brain development IBA
 biological_processGO:0021915 neural tube development IBA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0043565 sequence-specific DNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001115 trunk trunk increased width , abnormal
trunk shortened , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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