ENSDARG00000059900


Danio rerio

Features
Gene ID: ENSDARG00000059900
  
Biological name :tbc1d9
  
Synonyms : tbc1d9 / TBC1 domain family, member 9 (with GRAM domain)
  
Possible biological names infered from orthology : Q3UYK3 / Q6ZT07 / TBC1 domain family member 9
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 53321878
Gene end: 53361108
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000115027
NCBI entrez gene - 563578     See in Manteia.
swissprot - F1Q7J9
ZFIN ID - ZDB-GENE-060810-33
Ensembl - ENSDARG00000059900
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TBC1D9ENSGALG00000009855Gallus gallus
 Q6ZT07ENSG00000109436Homo sapiens
 Q3UYK3ENSMUSG00000031709Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tbc1d9 / TBC1 domain family, member 9 (with GRAM domain) / Q66K14* / TBC1D9B* / TBC1 domain family member 9B*ENSDARG0000004362764
B0R0W9 / TBC1D8B / si:dkey-110k5.6 / Q0IIM8* / A3KGB4* / TBC1 domain family member 8B*ENSDARG0000006219242
LO018176.1 / O95759* / TBC1D8* / TBC1 domain family member 8*ENSDARG0000010449335
tbc1d2b / TBC1 domain family, member 2B / Q3U0J8* / Q9UPU7*ENSDARG0000006198613
tbc1d2 / TBC1 domain family, member 2 / B1AVH7* / Q9BYX2* / TBC1 domain family member 2A *ENSDARG0000007130412
sgsm3 / Q7T2D0 / small G protein signaling modulator 3 / Q8VCZ6* / Q96HU1*ENSDARG0000001903811
tbc1d30 / TBC1 domain family, member 30 / Q69ZT9* / Q9Y2I9*ENSDARG0000007528111


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain
 IPR002048  EF-hand domain
 IPR004182  GRAM domain
 IPR011992  EF-hand domain pair
 IPR011993  PH-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0090630 activation of GTPase activity IBA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0012505 endomembrane system IBA
 molecular_functionGO:0005096 GTPase activator activity IBA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0017137 Rab GTPase binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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