ENSDARG00000071304


Danio rerio

Features
Gene ID: ENSDARG00000071304
  
Biological name :tbc1d2
  
Synonyms : tbc1d2 / TBC1 domain family, member 2
  
Possible biological names infered from orthology : B1AVH7 / Q9BYX2 / TBC1 domain family member 2A
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 6287871
Gene end: 6329931
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000096116
NCBI entrez gene - 561110     See in Manteia.
swissprot - E7F513
ZFIN ID - ZDB-GENE-140106-100
Ensembl - ENSDARG00000071304
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TBC1D2ENSGALG00000001944Gallus gallus
 Q9BYX2ENSG00000095383Homo sapiens
 B1AVH7ENSMUSG00000039813Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tbc1d2b / TBC1 domain family, member 2B / Q3U0J8* / Q9UPU7*ENSDARG0000006198637
tbc1d9 / TBC1 domain family, member 9 (with GRAM domain) / Q66K14* / TBC1D9B* / TBC1 domain family member 9B*ENSDARG0000004362716
tbc1d9 / TBC1 domain family, member 9 (with GRAM domain) / Q3UYK3* / Q6ZT07* / TBC1 domain family member 9*ENSDARG0000005990016
B0R0W9 / TBC1D8B / si:dkey-110k5.6 / Q0IIM8* / A3KGB4* / TBC1 domain family member 8B*ENSDARG0000006219215
sgsm3 / Q7T2D0 / small G protein signaling modulator 3 / Q8VCZ6* / Q96HU1*ENSDARG0000001903813
LO018176.1 / O95759* / TBC1D8* / TBC1 domain family member 8*ENSDARG0000010449313
tbc1d30 / TBC1 domain family, member 30 / Q69ZT9* / Q9Y2I9*ENSDARG0000007528111


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain
 IPR001849  Pleckstrin homology domain
 IPR011993  PH-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0090630 activation of GTPase activity IBA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0012505 endomembrane system IBA
 molecular_functionGO:0005096 GTPase activator activity IBA
 molecular_functionGO:0017137 Rab GTPase binding IBA


Pathways (from Reactome)
Pathway description
TBC/RABGAPs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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