ENSDARG00000068582


Danio rerio

Features
Gene ID: ENSDARG00000068582
  
Biological name :rnf44
  
Synonyms : Q08CG8 / ring finger protein 44 / rnf44
  
Possible biological names infered from orthology : Q3UHJ8 / Q7L0R7
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 50918769
Gene end: 50975568
  
Corresponding Affymetrix probe sets: Dr.18132.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000153402
Ensembl peptide - ENSDARP00000141853
NCBI entrez gene - 767686     See in Manteia.
RefSeq - NM_001076624
RefSeq Peptide - NP_001070092
swissprot - A0A0R4IXY2
swissprot - Q08CG8
ZFIN ID - ZDB-GENE-060929-604
Ensembl - ENSDARG00000068582
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RNF44ENSGALG00000026443Gallus gallus
 RNF44ENSG00000146083Homo sapiens
 Rnf44ENSMUSG00000034928Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rnf38 / ring finger protein 38 / Q8BI21* / Q9H0F5* / Mus musculus ring finger protein 38 (Rnf38), transcript variant 3, mRNA.*ENSDARG0000006205561
si:ch211-59o9.10ENSDARG0000008996720
rnf6 / ring finger protein (C3H2C3 type) 6 / Q9Y252* / Q9DBU5* / ring finger protein 6* / E3 ubiquitin-protein ligase RNF6 *ENSDARG0000007795516
rlim / ring finger protein, LIM domain interacting / Q9NVW2* / Q9WTV7* / Mus musculus ring finger protein, LIM domain interacting (Rlim), transcript variant 2, mRNA.*ENSDARG0000007930615


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IBA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr